Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
MTHFRP42898 RNU6-37P-201ENST00000362692 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-11P-201ENST00000364234 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU4-20P-201ENST00000365601 151 ntBASIC2.56□□□□□ -2
MTHFRP42898 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.56□□□□□ -2
MTHFRP42898 RNU6-25P-201ENST00000383873 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-1-201ENST00000383898 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 Y_RNA.390-201ENST00000383932 102 ntBASIC2.56□□□□□ -2
MTHFRP42898 Y_RNA.399-201ENST00000383955 105 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-48P-201ENST00000384161 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-36P-201ENST00000384172 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-4P-201ENST00000384205 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-5P-201ENST00000384238 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-3P-201ENST00000384314 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-16P-201ENST00000384385 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-15P-201ENST00000384534 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-2-201ENST00000384627 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-29P-201ENST00000384637 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-9-201ENST00000384776 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-33P-201ENST00000384793 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 MIR1277-201ENST00000408536 78 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-908P-201ENST00000410160 94 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-1068P-201ENST00000410958 103 ntBASIC2.56□□□□□ -2
MTHFRP42898 HMGN2P3-201ENST00000433603 273 ntBASIC2.56□□□□□ -2
MTHFRP42898 HMGN2P5-201ENST00000436882 273 ntBASIC2.56□□□□□ -2
MTHFRP42898 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
MTHFRP42898 AC096638.1-201ENST00000444678 216 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU7-167P-201ENST00000459160 62 ntBASIC2.56□□□□□ -2
MTHFRP42898 DYNLL1P5-201ENST00000467158 270 ntBASIC2.56□□□□□ -2
MTHFRP42898 RPS29P25-201ENST00000481709 171 ntBASIC2.56□□□□□ -2
MTHFRP42898 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.56□□□□□ -2
MTHFRP42898 RNA5SP281-201ENST00000516504 135 ntBASIC2.56□□□□□ -2
MTHFRP42898 SNORA43.2-201ENST00000516652 128 ntBASIC2.56□□□□□ -2
MTHFRP42898 AC121758.2-201ENST00000553271 193 ntBASIC2.56□□□□□ -2
MTHFRP42898 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.56□□□□□ -2
MTHFRP42898 MTCO3P23-201ENST00000561363 289 ntBASIC2.56□□□□□ -2
MTHFRP42898 AC123912.5-201ENST00000605470 343 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-6P-201ENST00000606623 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 RNU6-91P-201ENST00000607774 107 ntBASIC2.56□□□□□ -2
MTHFRP42898 AC104458.1-201ENST00000608243 463 ntBASIC2.56□□□□□ -2
MTHFRP42898 YWHAEP7-203ENST00000622054 312 ntBASIC2.56□□□□□ -2
MTHFRP42898 Z69720.2-201ENST00000624755 279 ntBASIC2.56□□□□□ -2
MTHFRP42898 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
MTHFRP42898 MIR1321-201ENST00000637766 79 ntBASIC2.56□□□□□ -2
MTHFRP42898 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
MTHFRP42898 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.56□□□□□ -2
MTHFRP42898 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.56□□□□□ -2
MTHFRP42898 RBBP8P1-201ENST00000449447 1844 ntBASIC2.56□□□□□ -2
MTHFRP42898 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
MTHFRP42898 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MTHFRP42898 SNORD114-1-201ENST00000362705 72 ntBASIC2.55□□□□□ -2
MTHFRP42898 RNU6-78P-201ENST00000362897 107 ntBASIC2.55□□□□□ -2
MTHFRP42898 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
MTHFRP42898 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
MTHFRP42898 RNU6-266P-201ENST00000364225 107 ntBASIC2.55□□□□□ -2
MTHFRP42898 RNU6-534P-201ENST00000364877 106 ntBASIC2.55□□□□□ -2
MTHFRP42898 RNU4-66P-201ENST00000365199 138 ntBASIC2.55□□□□□ -2
MTHFRP42898 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
MTHFRP42898 Y_RNA.402-201ENST00000383972 102 ntBASIC2.55□□□□□ -2
MTHFRP42898 SNORA6-201ENST00000384033 151 ntBASIC2.55□□□□□ -2
MTHFRP42898 Y_RNA.480-201ENST00000384364 102 ntBASIC2.55□□□□□ -2
MTHFRP42898 MIR764-201ENST00000390811 85 ntBASIC2.55□□□□□ -2
MTHFRP42898 RNA5SP219-201ENST00000390940 113 ntBASIC2.55□□□□□ -2
MTHFRP42898 HMGB1P18-201ENST00000438801 619 ntBASIC2.55□□□□□ -2
MTHFRP42898 MTATP6P23-201ENST00000440153 476 ntBASIC2.55□□□□□ -2
MTHFRP42898 MTCO2P3-201ENST00000442543 421 ntBASIC2.55□□□□□ -2
MTHFRP42898 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.55□□□□□ -2
MTHFRP42898 AC012308.1-201ENST00000451232 178 ntBASIC2.55□□□□□ -2
MTHFRP42898 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.55□□□□□ -2
MTHFRP42898 AC112771.1-201ENST00000463581 102 ntBASIC2.55□□□□□ -2
MTHFRP42898 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.55□□□□□ -2
MTHFRP42898 RPL21P99-201ENST00000480369 423 ntBASIC2.55□□□□□ -2
MTHFRP42898 AC092989.1-201ENST00000481235 277 ntBASIC2.55□□□□□ -2
MTHFRP42898 RPL36AP48-201ENST00000485521 314 ntBASIC2.55□□□□□ -2
MTHFRP42898 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.55□□□□□ -2
MTHFRP42898 AC069439.1-201ENST00000494739 167 ntBASIC2.55□□□□□ -2
MTHFRP42898 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.55□□□□□ -2
MTHFRP42898 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.55□□□□□ -2
MTHFRP42898 SNORA25.17-201ENST00000517184 124 ntBASIC2.55□□□□□ -2
MTHFRP42898 IGLV3-17-201ENST00000519099 244 ntBASIC2.55□□□□□ -2
MTHFRP42898 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.55□□□□□ -2
MTHFRP42898 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.55□□□□□ -2
MTHFRP42898 AL118558.2-201ENST00000556294 238 ntBASIC2.55□□□□□ -2
MTHFRP42898 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.55□□□□□ -2
MTHFRP42898 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.55□□□□□ -2
MTHFRP42898 AC103810.6-201ENST00000606708 136 ntBASIC2.55□□□□□ -2
MTHFRP42898 RMST_7.1-201ENST00000621935 268 ntBASIC2.55□□□□□ -2
MTHFRP42898 AC241585.2-209ENST00000638217 143 ntBASIC2.55□□□□□ -2
MTHFRP42898 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MTHFRP42898 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
MTHFRP42898 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
MTHFRP42898 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
MTHFRP42898 Y_RNA.89-201ENST00000363031 102 ntBASIC2.54□□□□□ -2
MTHFRP42898 RNU5E-7P-201ENST00000365290 117 ntBASIC2.54□□□□□ -2
MTHFRP42898 RNU6-38P-201ENST00000384085 107 ntBASIC2.54□□□□□ -2
MTHFRP42898 RNU6-1140P-201ENST00000410517 106 ntBASIC2.54□□□□□ -2
MTHFRP42898 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.54□□□□□ -2
MTHFRP42898 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
MTHFRP42898 MTCO1P20-201ENST00000425366 358 ntBASIC2.54□□□□□ -2
MTHFRP42898 SRIP2-201ENST00000428470 166 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms