Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.2□□□□□ -2.44
HTTP42858 AC243964.1-201ENST00000441814 261 ntBASIC-0.2□□□□□ -2.44
HTTP42858 MTCO2P25-201ENST00000447065 681 ntBASIC-0.2□□□□□ -2.44
HTTP42858 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.2□□□□□ -2.44
HTTP42858 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
HTTP42858 AC090888.2-201ENST00000559765 1144 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.2□□□□□ -2.44
HTTP42858 AC069294.1-201ENST00000608397 350 ntBASIC-0.2□□□□□ -2.44
HTTP42858 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.2□□□□□ -2.44
HTTP42858 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.2□□□□□ -2.44
HTTP42858 AL138713.1-201ENST00000624026 2130 ntBASIC-0.2□□□□□ -2.44
HTTP42858 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.2□□□□□ -2.44
HTTP42858 RNU6-756P-201ENST00000383997 107 ntBASIC-0.2□□□□□ -2.44
HTTP42858 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.2□□□□□ -2.44
HTTP42858 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.2□□□□□ -2.44
HTTP42858 BTF3P8-201ENST00000414577 526 ntBASIC-0.2□□□□□ -2.44
HTTP42858 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.2□□□□□ -2.44
HTTP42858 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.2□□□□□ -2.44
HTTP42858 MTCO2P18-201ENST00000457151 658 ntBASIC-0.2□□□□□ -2.44
HTTP42858 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.2□□□□□ -2.44
HTTP42858 Z82243.1-201ENST00000609432 473 ntBASIC-0.2□□□□□ -2.44
HTTP42858 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.2□□□□□ -2.44
HTTP42858 MIR4320-201ENST00000636981 65 ntBASIC-0.2□□□□□ -2.44
HTTP42858 RNU1-39P-201ENST00000383897 165 ntBASIC-0.21□□□□□ -2.44
HTTP42858 MIR520F-201ENST00000384824 87 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.21□□□□□ -2.44
HTTP42858 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.21□□□□□ -2.44
HTTP42858 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.21□□□□□ -2.44
HTTP42858 SNORD126-201ENST00000459475 77 ntBASIC-0.21□□□□□ -2.44
HTTP42858 VPS26AP1-201ENST00000483197 979 ntBASIC-0.21□□□□□ -2.44
HTTP42858 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.21□□□□□ -2.44
HTTP42858 AC027104.1-201ENST00000563702 681 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AC104408.1-201ENST00000605241 170 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AC112220.2-201ENST00000605513 533 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.21□□□□□ -2.44
HTTP42858 AC013468.1-201ENST00000608680 598 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AL049737.1-201ENST00000413920 1403 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AP000797.1-201ENST00000478870 387 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AL121579.1-201ENST00000555129 305 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.21□□□□□ -2.44
HTTP42858 HMGB1P33-201ENST00000563485 527 ntBASIC-0.21□□□□□ -2.44
HTTP42858 RPL23AP91-201ENST00000569211 455 ntBASIC-0.21□□□□□ -2.44
HTTP42858 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AC090330.1-201ENST00000588646 764 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AC010615.3-201ENST00000597319 394 ntBASIC-0.21□□□□□ -2.44
HTTP42858 AL009028.1-201ENST00000604895 802 ntBASIC-0.21□□□□□ -2.44
HTTP42858 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.21□□□□□ -2.44
HTTP42858 RNU6-163P-201ENST00000384396 106 ntBASIC-0.22□□□□□ -2.44
HTTP42858 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
HTTP42858 SNX2P2-201ENST00000424553 323 ntBASIC-0.22□□□□□ -2.44
HTTP42858 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
HTTP42858 RPS20P24-201ENST00000457473 361 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.22□□□□□ -2.44
HTTP42858 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.22□□□□□ -2.44
HTTP42858 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-0.22□□□□□ -2.44
HTTP42858 AC015688.2-201ENST00000584523 262 ntBASIC-0.22□□□□□ -2.44
HTTP42858 MIR8063-201ENST00000621930 81 ntBASIC-0.22□□□□□ -2.44
HTTP42858 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.22□□□□□ -2.44
HTTP42858 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.22□□□□□ -2.44
HTTP42858 MIR145-201ENST00000384967 88 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.22□□□□□ -2.44
HTTP42858 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.22□□□□□ -2.44
HTTP42858 AC091860.1-201ENST00000505723 432 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.22□□□□□ -2.44
HTTP42858 AC124293.1-201ENST00000530034 493 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.22□□□□□ -2.44
HTTP42858 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.22□□□□□ -2.44
HTTP42858 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.22□□□□□ -2.44
HTTP42858 AC087685.1-201ENST00000587507 141 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AC107304.1-201ENST00000604229 296 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AC024581.2-201ENST00000619986 252 ntBASIC-0.22□□□□□ -2.44
HTTP42858 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.22□□□□□ -2.44
HTTP42858 RNU6-793P-201ENST00000384233 104 ntBASIC-0.22□□□□□ -2.45
HTTP42858 PRRC2CP1-201ENST00000404428 159 ntBASIC-0.22□□□□□ -2.45
HTTP42858 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.22□□□□□ -2.45
HTTP42858 MTATP6P23-201ENST00000440153 476 ntBASIC-0.22□□□□□ -2.45
HTTP42858 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.22□□□□□ -2.45
HTTP42858 RAD1P2-201ENST00000446414 663 ntBASIC-0.22□□□□□ -2.45
HTTP42858 AC112771.1-201ENST00000463581 102 ntBASIC-0.22□□□□□ -2.45
HTTP42858 MTATP6P9-201ENST00000515039 680 ntBASIC-0.22□□□□□ -2.45
HTTP42858 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.22□□□□□ -2.45
HTTP42858 AC105129.3-201ENST00000605455 485 ntBASIC-0.22□□□□□ -2.45
HTTP42858 AC078938.1-201ENST00000620993 318 ntBASIC-0.22□□□□□ -2.45
HTTP42858 uc_338.36-201ENST00000622331 158 ntBASIC-0.22□□□□□ -2.45
HTTP42858 AC090772.4-201ENST00000623599 362 ntBASIC-0.22□□□□□ -2.45
HTTP42858 MIR18A-201ENST00000362310 71 ntBASIC-0.23□□□□□ -2.45
HTTP42858 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.23□□□□□ -2.45
HTTP42858 SNORA81-201ENST00000408493 178 ntBASIC-0.23□□□□□ -2.45
HTTP42858 RNU6-712P-201ENST00000410558 100 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AL161935.2-201ENST00000414627 60 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AL353777.1-201ENST00000425552 326 ntBASIC-0.23□□□□□ -2.45
HTTP42858 RAB28P5-201ENST00000427490 651 ntBASIC-0.23□□□□□ -2.45
HTTP42858 GTF2IP3-201ENST00000433887 494 ntBASIC-0.23□□□□□ -2.45
HTTP42858 SNRPEP9-201ENST00000436794 238 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.23□□□□□ -2.45
HTTP42858 MTCO3P18-201ENST00000440206 761 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AC069257.2-201ENST00000441819 155 ntBASIC-0.23□□□□□ -2.45
HTTP42858 RNU7-21P-201ENST00000459430 62 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms