Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.5□□□□□ -2.01
HNF4AP41235 LARP7P1-201ENST00000605576 316 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.5□□□□□ -2.01
HNF4AP41235 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.5□□□□□ -2.01
HNF4AP41235 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
HNF4AP41235 RNU6-858P-201ENST00000362436 107 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 RNU6-1303P-201ENST00000364841 107 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HNF4AP41235 Y_RNA.399-201ENST00000383955 105 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 RNU6-434P-201ENST00000384376 107 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 RNU1-148P-201ENST00000384472 162 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 RNA5SP219-201ENST00000390940 113 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AL133475.1-201ENST00000404414 305 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 U3.37-201ENST00000408528 213 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 Y_RNA.623-201ENST00000411128 95 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.49□□□□□ -2.01
HNF4AP41235 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.49□□□□□ -2.01
HNF4AP41235 NUP35P1-201ENST00000422734 947 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.49□□□□□ -2.01
HNF4AP41235 AC012308.1-201ENST00000451232 178 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.49□□□□□ -2.01
HNF4AP41235 RNU7-66P-201ENST00000459469 62 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 MTND3P25-201ENST00000509243 135 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.49□□□□□ -2.01
HNF4AP41235 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
HNF4AP41235 RNU4-49P-201ENST00000516080 140 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AC090115.3-201ENST00000553218 849 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.49□□□□□ -2.01
HNF4AP41235 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.49□□□□□ -2.01
HNF4AP41235 VN1R80P-201ENST00000597126 338 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AC092747.3-201ENST00000603769 301 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AL355297.2-201ENST00000604792 129 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AL357078.3-201ENST00000607528 618 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AC011890.2-201ENST00000613393 294 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 AC012640.5-201ENST00000623897 319 ntBASIC2.49□□□□□ -2.01
HNF4AP41235 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
HNF4AP41235 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
HNF4AP41235 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.48□□□□□ -2.01
HNF4AP41235 RNU1-91P-201ENST00000364746 163 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 SNORD81.2-201ENST00000365153 76 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 MIR34A-201ENST00000385130 110 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 RNA5SP270-201ENST00000411361 118 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 ARL5AP1-201ENST00000418991 388 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC063976.3-201ENST00000426849 329 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AL627311.1-201ENST00000431514 115 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.48□□□□□ -2.01
HNF4AP41235 IFNA20P-201ENST00000436840 528 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.48□□□□□ -2.01
HNF4AP41235 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.48□□□□□ -2.01
HNF4AP41235 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.48□□□□□ -2.01
HNF4AP41235 AC090515.1-201ENST00000465295 476 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC087884.1-201ENST00000469738 328 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 MED28P2-201ENST00000475771 317 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC140059.1-201ENST00000489238 361 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.48□□□□□ -2.01
HNF4AP41235 RNU6-189P-201ENST00000516120 101 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.48□□□□□ -2.01
HNF4AP41235 AC243972.3-201ENST00000539655 198 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 SCOCP1-201ENST00000554676 349 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 MIR548AC-201ENST00000585049 88 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC091135.1-201ENST00000585943 307 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AL161423.1-201ENST00000613700 262 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 Y_RNA.804-201ENST00000615262 101 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC103705.1-201ENST00000619013 241 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 AC022418.1-201ENST00000624118 445 ntBASIC2.48□□□□□ -2.01
HNF4AP41235 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HNF4AP41235 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.48□□□□□ -2.01
HNF4AP41235 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HNF4AP41235 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HNF4AP41235 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HNF4AP41235 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HNF4AP41235 AC121333.1-201ENST00000567488 2709 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 AC062016.1-201ENST00000355719 319 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 SNORD3E-201ENST00000362899 217 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 RNU1-72P-201ENST00000362976 153 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 Y_RNA.100-201ENST00000363141 102 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 SNORD23.1-201ENST00000408212 104 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 CYCSP33-201ENST00000414485 327 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 AC016831.2-201ENST00000417179 352 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 AC009161.1-201ENST00000417306 376 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 MTCO3P46-201ENST00000425787 232 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.47□□□□□ -2.01
HNF4AP41235 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.47□□□□□ -2.01
HNF4AP41235 AL161788.1-201ENST00000441805 169 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 NDUFB1P2-201ENST00000449477 176 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.47□□□□□ -2.01
HNF4AP41235 RNU7-167P-201ENST00000459160 62 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 RNU6-329P-201ENST00000459618 107 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 RPL7P43-201ENST00000478876 753 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.47□□□□□ -2.01
HNF4AP41235 RNU7-30P-201ENST00000516835 62 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 RN7SKP256-201ENST00000517201 314 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.47□□□□□ -2.01
HNF4AP41235 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.47□□□□□ -2.01
HNF4AP41235 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.47□□□□□ -2.01
HNF4AP41235 AL121757.2-201ENST00000611223 313 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms