Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR1323-201ENST00000408090 73 ntBASIC1.45□□□□□ -2.18
RFC3P40938 RNU2-3P-201ENST00000410144 191 ntBASIC1.45□□□□□ -2.18
RFC3P40938 RNU6-607P-201ENST00000411283 108 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AL513185.2-201ENST00000425543 193 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AL591043.1-201ENST00000432461 424 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC000111.3-201ENST00000433478 193 ntBASIC1.45□□□□□ -2.18
RFC3P40938 MTATP6P16-201ENST00000434543 526 ntBASIC1.45□□□□□ -2.18
RFC3P40938 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.45□□□□□ -2.18
RFC3P40938 ZNF114P1-201ENST00000453500 292 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AL122001.1-201ENST00000457027 370 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.45□□□□□ -2.18
RFC3P40938 AC116562.3-201ENST00000506136 177 ntBASIC1.45□□□□□ -2.18
RFC3P40938 MTND3P25-201ENST00000509243 135 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC009646.1-201ENST00000510455 318 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.45□□□□□ -2.18
RFC3P40938 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.45□□□□□ -2.18
RFC3P40938 AC068587.5-201ENST00000528506 175 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AP002453.2-201ENST00000533503 320 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.45□□□□□ -2.18
RFC3P40938 MIR4498-201ENST00000577599 66 ntBASIC1.45□□□□□ -2.18
RFC3P40938 MIR3198-2-201ENST00000577868 80 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC073539.2-201ENST00000597113 165 ntBASIC1.45□□□□□ -2.18
RFC3P40938 BNIP3P39-201ENST00000601077 554 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC010900.2-201ENST00000604508 210 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AL121992.2-201ENST00000606262 256 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC022960.3-201ENST00000619794 441 ntBASIC1.45□□□□□ -2.18
RFC3P40938 AC138649.3-201ENST00000622154 254 ntBASIC1.45□□□□□ -2.18
RFC3P40938 CBX3P1-201ENST00000325243 554 ntBASIC1.44□□□□□ -2.18
RFC3P40938 RNU5F-7P-201ENST00000363696 115 ntBASIC1.44□□□□□ -2.18
RFC3P40938 SNORA20.2-201ENST00000383922 131 ntBASIC1.44□□□□□ -2.18
RFC3P40938 RNU6-1222P-201ENST00000384615 107 ntBASIC1.44□□□□□ -2.18
RFC3P40938 SNORA48.1-201ENST00000390879 135 ntBASIC1.44□□□□□ -2.18
RFC3P40938 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
RFC3P40938 MIR934-201ENST00000401241 83 ntBASIC1.44□□□□□ -2.18
RFC3P40938 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.44□□□□□ -2.18
RFC3P40938 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.44□□□□□ -2.18
RFC3P40938 CYCSP33-201ENST00000414485 327 ntBASIC1.44□□□□□ -2.18
RFC3P40938 AP1B1P2-201ENST00000416196 106 ntBASIC1.44□□□□□ -2.18
RFC3P40938 C1DP2-201ENST00000418167 426 ntBASIC1.44□□□□□ -2.18
RFC3P40938 AL590556.1-201ENST00000423231 483 ntBASIC1.44□□□□□ -2.18
RFC3P40938 AL593851.1-201ENST00000426171 157 ntBASIC1.44□□□□□ -2.18
RFC3P40938 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.44□□□□□ -2.18
RFC3P40938 TAF9P1-201ENST00000445421 515 ntBASIC1.44□□□□□ -2.18
RFC3P40938 AL035666.1-201ENST00000446195 348 ntBASIC1.44□□□□□ -2.18
RFC3P40938 TAF9P2-201ENST00000454958 515 ntBASIC1.44□□□□□ -2.18
RFC3P40938 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.44□□□□□ -2.18
RFC3P40938 RAP1BP2-201ENST00000478270 544 ntBASIC1.44□□□□□ -2.18
RFC3P40938 TPT1P8-201ENST00000510120 555 ntBASIC1.44□□□□□ -2.18
RFC3P40938 RNU6-1053P-201ENST00000515930 101 ntBASIC1.44□□□□□ -2.18
RFC3P40938 SCARNA24.1-201ENST00000516465 137 ntBASIC1.44□□□□□ -2.18
RFC3P40938 RNU6-1220P-201ENST00000517126 108 ntBASIC1.44□□□□□ -2.18
RFC3P40938 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.44□□□□□ -2.18
RFC3P40938 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.44□□□□□ -2.18
RFC3P40938 AC005771.1-201ENST00000585581 349 ntBASIC1.44□□□□□ -2.18
RFC3P40938 snoU13.31-201ENST00000607291 104 ntBASIC1.44□□□□□ -2.18
RFC3P40938 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
RFC3P40938 ZNF680P1-201ENST00000436625 1469 ntBASIC1.43□□□□□ -2.18
RFC3P40938 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RFC3P40938 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RFC3P40938 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RFC3P40938 Y_RNA.4-201ENST00000362333 112 ntBASIC1.43□□□□□ -2.18
RFC3P40938 RNU6-169P-201ENST00000365336 107 ntBASIC1.43□□□□□ -2.18
RFC3P40938 Y_RNA.576-201ENST00000384781 102 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AC068050.1-201ENST00000394891 380 ntBASIC1.43□□□□□ -2.18
RFC3P40938 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.43□□□□□ -2.18
RFC3P40938 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.43□□□□□ -2.18
RFC3P40938 UBE2D3P4-201ENST00000441973 436 ntBASIC1.43□□□□□ -2.18
RFC3P40938 RNU6-333P-201ENST00000459117 107 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AC027575.1-201ENST00000481064 460 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.43□□□□□ -2.18
RFC3P40938 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.43□□□□□ -2.18
RFC3P40938 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.43□□□□□ -2.18
RFC3P40938 RNU5F-2P-201ENST00000516066 82 ntBASIC1.43□□□□□ -2.18
RFC3P40938 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AC115990.1-201ENST00000526957 301 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.43□□□□□ -2.18
RFC3P40938 AP005435.4-201ENST00000529514 284 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.43□□□□□ -2.18
RFC3P40938 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AC004223.4-201ENST00000612426 332 ntBASIC1.43□□□□□ -2.18
RFC3P40938 AC009159.2-201ENST00000617603 606 ntBASIC1.43□□□□□ -2.18
RFC3P40938 Z69720.2-201ENST00000624755 279 ntBASIC1.43□□□□□ -2.18
RFC3P40938 U4.7-201ENST00000638126 106 ntBASIC1.43□□□□□ -2.18
RFC3P40938 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
RFC3P40938 MTND5P17-201ENST00000418405 1603 ntBASIC1.42□□□□□ -2.18
RFC3P40938 MIR126-201ENST00000362291 85 ntBASIC1.42□□□□□ -2.18
RFC3P40938 RNU6-527P-201ENST00000363425 104 ntBASIC1.42□□□□□ -2.18
RFC3P40938 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
RFC3P40938 RNU6-160P-201ENST00000384591 107 ntBASIC1.42□□□□□ -2.18
RFC3P40938 MIR544A-201ENST00000384855 91 ntBASIC1.42□□□□□ -2.18
RFC3P40938 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.42□□□□□ -2.18
RFC3P40938 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
RFC3P40938 RNU6-174P-201ENST00000410406 106 ntBASIC1.42□□□□□ -2.18
RFC3P40938 Y_RNA.598-201ENST00000410480 95 ntBASIC1.42□□□□□ -2.18
RFC3P40938 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.42□□□□□ -2.18
RFC3P40938 RNU7-95P-201ENST00000459222 64 ntBASIC1.42□□□□□ -2.18
RFC3P40938 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.42□□□□□ -2.18
RFC3P40938 AC104806.1-201ENST00000508720 308 ntBASIC1.42□□□□□ -2.18
RFC3P40938 FABP5P5-201ENST00000515537 406 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms