Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM23P36406 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM23P36406 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM23P36406 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM23P36406 RNU6-529P-201ENST00000363383 104 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 RNU5E-7P-201ENST00000365290 117 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 SNORD116-20-201ENST00000384529 92 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 MIR95-201ENST00000385072 81 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 RN7SKP32-201ENST00000410167 303 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 RNU4-26P-201ENST00000410270 107 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 AC016691.1-201ENST00000441321 413 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 AC010095.1-201ENST00000443543 144 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 MTND1P1-201ENST00000445453 368 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 RNU7-167P-201ENST00000459160 62 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM23P36406 AP001025.1-201ENST00000486139 332 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM23P36406 COPS8P3-201ENST00000526024 482 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM23P36406 AC104383.1-201ENST00000530297 370 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM23P36406 AC023050.3-201ENST00000541142 333 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 AC135279.1-201ENST00000543493 504 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM23P36406 AC090897.2-201ENST00000581715 130 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 MIR4424-201ENST00000585257 86 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 Z82243.1-201ENST00000609432 473 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
TRIM23P36406 MIR6715A-201ENST00000615929 79 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 AC009233.1-201ENST00000616477 371 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 AL359880.1-201ENST00000621879 266 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 OR5AK4P-201ENST00000635912 903 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
TRIM23P36406 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM23P36406 RNU6-78P-201ENST00000362897 107 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 RNU6-82P-201ENST00000363970 107 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 RNU1-57P-201ENST00000384491 166 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 MTCO3P40-201ENST00000392516 676 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 UBE2V1P10-201ENST00000414685 269 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM23P36406 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.12□□□□□ -2.07
TRIM23P36406 HMGB1P31-201ENST00000437242 427 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AL161788.1-201ENST00000441805 169 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM23P36406 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM23P36406 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 snoU13.14-201ENST00000459372 104 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AC068781.1-201ENST00000488231 618 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM23P36406 AC069113.1-201ENST00000517763 267 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 MTND4P7-201ENST00000523876 130 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM23P36406 VN1R107P-201ENST00000601784 209 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AC093783.1-201ENST00000612976 329 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AL354950.2-201ENST00000617939 290 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AC008121.3-201ENST00000618726 433 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 AL158209.2-201ENST00000619266 216 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM23P36406 AC002543.1-201ENST00000299783 1954 ntBASIC2.12□□□□□ -2.07
TRIM23P36406 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TRIM23P36406 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM23P36406 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM23P36406 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM23P36406 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 RNU2-23P-201ENST00000410545 195 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM23P36406 MTCYBP8-201ENST00000422855 651 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AL606489.2-201ENST00000433886 234 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AC009238.1-201ENST00000442165 424 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 MTCO2P7-201ENST00000446518 666 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AC009237.6-201ENST00000446969 424 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 FDX1P2-201ENST00000450769 375 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 snoU13.26-201ENST00000459452 105 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 SRRM1P2-201ENST00000464531 1192 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AC091885.1-201ENST00000506658 268 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM23P36406 SNORA25.17-201ENST00000517184 124 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM23P36406 CYCSP27-201ENST00000527643 293 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AC118273.2-201ENST00000532092 465 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM23P36406 AC103987.3-201ENST00000582071 292 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AC073410.2-201ENST00000603240 332 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 U2.17-201ENST00000611454 95 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM23P36406 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AC007792.1-201ENST00000623023 402 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 MIR6863-201ENST00000636112 90 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM23P36406 ZNF720P1-201ENST00000562403 1939 ntBASIC2.11□□□□□ -2.07
TRIM23P36406 AL354685.2-201ENST00000448218 1447 ntBASIC2.1□□□□□ -2.07
TRIM23P36406 SNORD114-1-201ENST00000362705 72 ntBASIC2.1□□□□□ -2.07
TRIM23P36406 RNU6-1085P-201ENST00000363576 107 ntBASIC2.1□□□□□ -2.07
TRIM23P36406 RNU1-148P-201ENST00000384472 162 ntBASIC2.1□□□□□ -2.07
TRIM23P36406 AC068050.1-201ENST00000394891 380 ntBASIC2.1□□□□□ -2.07
TRIM23P36406 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.1□□□□□ -2.07
TRIM23P36406 MTCO3P41-201ENST00000414801 328 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms