Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR4422-201ENST00000581938 83 ntBASIC1.19□□□□□ -2.22
RPA3P35244 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.19□□□□□ -2.22
RPA3P35244 AC073413.2-201ENST00000604332 360 ntBASIC1.19□□□□□ -2.22
RPA3P35244 PRR13P7-201ENST00000605538 430 ntBASIC1.19□□□□□ -2.22
RPA3P35244 AP000654.2-201ENST00000605633 586 ntBASIC1.19□□□□□ -2.22
RPA3P35244 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.19□□□□□ -2.22
RPA3P35244 RMST_7.1-201ENST00000621935 268 ntBASIC1.19□□□□□ -2.22
RPA3P35244 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPA3P35244 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
RPA3P35244 RNU6-78P-201ENST00000362897 107 ntBASIC1.18□□□□□ -2.22
RPA3P35244 RNU6-112P-201ENST00000363599 104 ntBASIC1.18□□□□□ -2.22
RPA3P35244 SNORA62.1-201ENST00000364287 154 ntBASIC1.18□□□□□ -2.22
RPA3P35244 SNORA12-201ENST00000391162 147 ntBASIC1.18□□□□□ -2.22
RPA3P35244 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.18□□□□□ -2.22
RPA3P35244 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.18□□□□□ -2.22
RPA3P35244 MTND1P32-201ENST00000433043 938 ntBASIC1.18□□□□□ -2.22
RPA3P35244 HMGN2P18-201ENST00000450680 270 ntBASIC1.18□□□□□ -2.22
RPA3P35244 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.18□□□□□ -2.22
RPA3P35244 AC112492.4-201ENST00000456549 352 ntBASIC1.18□□□□□ -2.22
RPA3P35244 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.18□□□□□ -2.22
RPA3P35244 RNU5F-2P-201ENST00000516066 82 ntBASIC1.18□□□□□ -2.22
RPA3P35244 MTND4LP18-201ENST00000526864 291 ntBASIC1.18□□□□□ -2.22
RPA3P35244 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.18□□□□□ -2.22
RPA3P35244 AC084364.2-201ENST00000546924 395 ntBASIC1.18□□□□□ -2.22
RPA3P35244 AC105148.1-201ENST00000604961 409 ntBASIC1.18□□□□□ -2.22
RPA3P35244 AL139286.2-201ENST00000606838 396 ntBASIC1.18□□□□□ -2.22
RPA3P35244 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
RPA3P35244 AC131159.1-201ENST00000621854 213 ntBASIC1.18□□□□□ -2.22
RPA3P35244 AC097372.5-201ENST00000623665 376 ntBASIC1.18□□□□□ -2.22
RPA3P35244 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
RPA3P35244 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RPA3P35244 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RPA3P35244 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RPA3P35244 RNU4-91P-201ENST00000364778 135 ntBASIC1.17□□□□□ -2.22
RPA3P35244 SNORA24.1-201ENST00000384401 135 ntBASIC1.17□□□□□ -2.22
RPA3P35244 RNU6-906P-201ENST00000384700 70 ntBASIC1.17□□□□□ -2.22
RPA3P35244 MIR544A-201ENST00000384855 91 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AL357139.1-201ENST00000407792 426 ntBASIC1.17□□□□□ -2.22
RPA3P35244 EEF1A1P40-201ENST00000412883 573 ntBASIC1.17□□□□□ -2.22
RPA3P35244 RPL21P90-201ENST00000415692 466 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.17□□□□□ -2.22
RPA3P35244 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC007283.2-201ENST00000424739 197 ntBASIC1.17□□□□□ -2.22
RPA3P35244 CALM2P2-201ENST00000428512 440 ntBASIC1.17□□□□□ -2.22
RPA3P35244 RPS6P15-201ENST00000431996 751 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AL603825.1-201ENST00000438481 80 ntBASIC1.17□□□□□ -2.22
RPA3P35244 MTCO1P44-201ENST00000441935 243 ntBASIC1.17□□□□□ -2.22
RPA3P35244 MTND5P2-201ENST00000442927 1142 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC087477.1-201ENST00000465747 340 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC132942.1-201ENST00000486753 483 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC099513.1-201ENST00000490423 301 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC098862.1-201ENST00000504991 413 ntBASIC1.17□□□□□ -2.22
RPA3P35244 RBBP4P6-201ENST00000508098 202 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC108729.3-201ENST00000513484 108 ntBASIC1.17□□□□□ -2.22
RPA3P35244 RNA5SP490-201ENST00000517141 136 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.17□□□□□ -2.22
RPA3P35244 MTND2P7-201ENST00000521337 640 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AP002453.2-201ENST00000533503 320 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.17□□□□□ -2.22
RPA3P35244 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
RPA3P35244 MIR5094-201ENST00000578766 85 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC005786.1-201ENST00000588553 154 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC123912.5-201ENST00000605470 343 ntBASIC1.17□□□□□ -2.22
RPA3P35244 AC068205.3-201ENST00000636385 468 ntBASIC1.17□□□□□ -2.22
RPA3P35244 LINC02555-201ENST00000563933 1951 ntBASIC1.17□□□□□ -2.22
RPA3P35244 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
RPA3P35244 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPA3P35244 Y_RNA.18-201ENST00000362461 102 ntBASIC1.16□□□□□ -2.22
RPA3P35244 RNU4-1-201ENST00000363925 141 ntBASIC1.16□□□□□ -2.22
RPA3P35244 RNU6-371P-201ENST00000364283 108 ntBASIC1.16□□□□□ -2.22
RPA3P35244 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
RPA3P35244 RNA5SP111-201ENST00000411386 101 ntBASIC1.16□□□□□ -2.22
RPA3P35244 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.16□□□□□ -2.22
RPA3P35244 RPS27AP14-201ENST00000422868 454 ntBASIC1.16□□□□□ -2.22
RPA3P35244 AC084290.1-201ENST00000434995 374 ntBASIC1.16□□□□□ -2.22
RPA3P35244 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.16□□□□□ -2.22
RPA3P35244 AC092473.1-201ENST00000441098 221 ntBASIC1.16□□□□□ -2.22
RPA3P35244 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.16□□□□□ -2.22
RPA3P35244 RNU6-333P-201ENST00000459117 107 ntBASIC1.16□□□□□ -2.22
RPA3P35244 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.16□□□□□ -2.22
RPA3P35244 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.16□□□□□ -2.22
RPA3P35244 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.16□□□□□ -2.22
RPA3P35244 AC104073.3-201ENST00000610942 955 ntBASIC1.16□□□□□ -2.22
RPA3P35244 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.16□□□□□ -2.22
RPA3P35244 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.16□□□□□ -2.22
RPA3P35244 AL031667.3-201ENST00000620124 655 ntBASIC1.16□□□□□ -2.22
RPA3P35244 AL157786.1-207ENST00000627771 695 ntBASIC1.16□□□□□ -2.22
RPA3P35244 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
RPA3P35244 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.22
RPA3P35244 ZNF29P-201ENST00000225587 168 ntBASIC1.15□□□□□ -2.23
RPA3P35244 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RPA3P35244 RNU6-414P-201ENST00000363705 104 ntBASIC1.15□□□□□ -2.23
RPA3P35244 Y_RNA.332-201ENST00000365271 113 ntBASIC1.15□□□□□ -2.23
RPA3P35244 Y_RNA.338-201ENST00000365320 114 ntBASIC1.15□□□□□ -2.23
RPA3P35244 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPA3P35244 RNU6-296P-201ENST00000384608 107 ntBASIC1.15□□□□□ -2.23
RPA3P35244 RAP1BP3-201ENST00000407180 549 ntBASIC1.15□□□□□ -2.23
RPA3P35244 MIR1267-201ENST00000408723 78 ntBASIC1.15□□□□□ -2.23
RPA3P35244 RPL23AP36-201ENST00000413895 458 ntBASIC1.15□□□□□ -2.23
RPA3P35244 C1DP2-201ENST00000418167 426 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms