Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
RXRBP28702 TNPO1P3-201ENST00000436471 2662 ntBASIC4.49□□□□□ -1.69
RXRBP28702 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.49□□□□□ -1.69
RXRBP28702 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
RXRBP28702 AC018555.1-201ENST00000567548 1980 ntBASIC4.49□□□□□ -1.69
RXRBP28702 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RXRBP28702 SNORA70B-201ENST00000384210 135 ntBASIC4.49□□□□□ -1.69
RXRBP28702 RPL23AP48-201ENST00000406913 488 ntBASIC4.49□□□□□ -1.69
RXRBP28702 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.49□□□□□ -1.69
RXRBP28702 CKS1BP5-201ENST00000434172 273 ntBASIC4.49□□□□□ -1.69
RXRBP28702 RN7SKP210-201ENST00000459176 261 ntBASIC4.49□□□□□ -1.69
RXRBP28702 U8.21-201ENST00000459536 136 ntBASIC4.49□□□□□ -1.69
RXRBP28702 RPL21P104-201ENST00000464143 478 ntBASIC4.49□□□□□ -1.69
RXRBP28702 COX6CP14-201ENST00000469580 174 ntBASIC4.49□□□□□ -1.69
RXRBP28702 RPL23AP45-201ENST00000476406 468 ntBASIC4.49□□□□□ -1.69
RXRBP28702 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.49□□□□□ -1.69
RXRBP28702 SEPT14P8-201ENST00000508026 178 ntBASIC4.49□□□□□ -1.69
RXRBP28702 AC008885.1-201ENST00000514930 301 ntBASIC4.49□□□□□ -1.69
RXRBP28702 SNORD116-28-201ENST00000516123 91 ntBASIC4.49□□□□□ -1.69
RXRBP28702 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.49□□□□□ -1.69
RXRBP28702 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.49□□□□□ -1.69
RXRBP28702 AC103996.1-201ENST00000555468 102 ntBASIC4.49□□□□□ -1.69
RXRBP28702 HMGB1P14-201ENST00000557424 591 ntBASIC4.49□□□□□ -1.69
RXRBP28702 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.49□□□□□ -1.69
RXRBP28702 AC004852.3-201ENST00000614131 326 ntBASIC4.49□□□□□ -1.69
RXRBP28702 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.49□□□□□ -1.69
RXRBP28702 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RXRBP28702 AC007390.2-201ENST00000606229 3803 ntBASIC4.49□□□□□ -1.69
RXRBP28702 OTUD4P1-201ENST00000237841 3067 ntBASIC4.49□□□□□ -1.69
RXRBP28702 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RXRBP28702 RNU5A-1-201ENST00000362698 116 ntBASIC4.48□□□□□ -1.69
RXRBP28702 RNU6-512P-201ENST00000364438 103 ntBASIC4.48□□□□□ -1.69
RXRBP28702 RNU6-290P-201ENST00000365212 101 ntBASIC4.48□□□□□ -1.69
RXRBP28702 RNA5SP184-201ENST00000411071 108 ntBASIC4.48□□□□□ -1.69
RXRBP28702 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.48□□□□□ -1.69
RXRBP28702 MTATP6P4-201ENST00000427725 675 ntBASIC4.48□□□□□ -1.69
RXRBP28702 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.48□□□□□ -1.69
RXRBP28702 snoU13.26-201ENST00000459452 105 ntBASIC4.48□□□□□ -1.69
RXRBP28702 AC087588.1-201ENST00000462203 316 ntBASIC4.48□□□□□ -1.69
RXRBP28702 ATP5F1P5-201ENST00000526403 760 ntBASIC4.48□□□□□ -1.69
RXRBP28702 MIR4319-201ENST00000577285 85 ntBASIC4.48□□□□□ -1.69
RXRBP28702 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RXRBP28702 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.48□□□□□ -1.69
RXRBP28702 Y_RNA.772-201ENST00000606692 102 ntBASIC4.48□□□□□ -1.69
RXRBP28702 AL365265.1-201ENST00000621045 234 ntBASIC4.48□□□□□ -1.69
RXRBP28702 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RXRBP28702 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RXRBP28702 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RXRBP28702 HAUS6P2-201ENST00000433254 2404 ntBASIC4.47□□□□□ -1.69
RXRBP28702 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.47□□□□□ -1.69
RXRBP28702 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.47□□□□□ -1.69
RXRBP28702 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RXRBP28702 Y_RNA.44-201ENST00000362676 108 ntBASIC4.47□□□□□ -1.69
RXRBP28702 SNORD50B-201ENST00000364995 70 ntBASIC4.47□□□□□ -1.69
RXRBP28702 RNU6-1081P-201ENST00000384537 107 ntBASIC4.47□□□□□ -1.69
RXRBP28702 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RXRBP28702 MTHFD2P2-201ENST00000407725 247 ntBASIC4.47□□□□□ -1.69
RXRBP28702 RNU6-651P-201ENST00000411040 105 ntBASIC4.47□□□□□ -1.69
RXRBP28702 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.47□□□□□ -1.69
RXRBP28702 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.47□□□□□ -1.69
RXRBP28702 MRPL42P6-201ENST00000486397 371 ntBASIC4.47□□□□□ -1.69
RXRBP28702 AC091144.1-201ENST00000519573 138 ntBASIC4.47□□□□□ -1.69
RXRBP28702 AP006245.1-201ENST00000522549 120 ntBASIC4.47□□□□□ -1.69
RXRBP28702 AC084851.1-201ENST00000529105 249 ntBASIC4.47□□□□□ -1.69
RXRBP28702 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.47□□□□□ -1.69
RXRBP28702 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.47□□□□□ -1.69
RXRBP28702 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.47□□□□□ -1.69
RXRBP28702 AC072026.1-201ENST00000605023 201 ntBASIC4.47□□□□□ -1.69
RXRBP28702 AC011476.5-201ENST00000615594 130 ntBASIC4.47□□□□□ -1.69
RXRBP28702 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
RXRBP28702 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
RXRBP28702 Y_RNA.33-201ENST00000362591 102 ntBASIC4.46□□□□□ -1.7
RXRBP28702 RNU6-395P-201ENST00000365662 106 ntBASIC4.46□□□□□ -1.7
RXRBP28702 Y_RNA.504-201ENST00000384481 104 ntBASIC4.46□□□□□ -1.7
RXRBP28702 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.46□□□□□ -1.7
RXRBP28702 HMGN2P7-201ENST00000456186 273 ntBASIC4.46□□□□□ -1.7
RXRBP28702 ANXA2P1-201ENST00000505539 926 ntBASIC4.46□□□□□ -1.7
RXRBP28702 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.46□□□□□ -1.7
RXRBP28702 RNU6-612P-201ENST00000516909 102 ntBASIC4.46□□□□□ -1.7
RXRBP28702 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.46□□□□□ -1.7
RXRBP28702 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.46□□□□□ -1.7
RXRBP28702 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.46□□□□□ -1.7
RXRBP28702 BRDTP1-201ENST00000605735 677 ntBASIC4.46□□□□□ -1.7
RXRBP28702 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RXRBP28702 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RXRBP28702 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.46□□□□□ -1.7
RXRBP28702 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RXRBP28702 AC009812.4-201ENST00000569134 1805 ntBASIC4.46□□□□□ -1.7
RXRBP28702 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
RXRBP28702 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.46□□□□□ -1.7
RXRBP28702 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RXRBP28702 AL136964.1-201ENST00000622038 2990 ntBASIC4.45□□□□□ -1.7
RXRBP28702 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.45□□□□□ -1.7
RXRBP28702 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RXRBP28702 RNU6-858P-201ENST00000362436 107 ntBASIC4.45□□□□□ -1.7
RXRBP28702 RNU6-1301P-201ENST00000362724 104 ntBASIC4.45□□□□□ -1.7
RXRBP28702 SNORD14B-201ENST00000364533 90 ntBASIC4.45□□□□□ -1.7
RXRBP28702 Y_RNA.292-201ENST00000364904 97 ntBASIC4.45□□□□□ -1.7
RXRBP28702 Y_RNA.383-201ENST00000383855 97 ntBASIC4.45□□□□□ -1.7
RXRBP28702 RNU6-804P-201ENST00000384286 107 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms