Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ABCD3P28288 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ABCD3P28288 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ABCD3P28288 AC092268.1-201ENST00000342691 405 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 RNU6-562P-201ENST00000362731 107 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 SNORA38-201ENST00000363946 132 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 RNA5SP125-201ENST00000364843 120 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 RNU6-933P-201ENST00000384424 107 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 MIR29B2-201ENST00000385055 81 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 BTF3L4P2-201ENST00000392798 346 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.66□□□□□ -1.98
ABCD3P28288 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.66□□□□□ -1.98
ABCD3P28288 AC244670.1-201ENST00000436879 112 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.66□□□□□ -1.98
ABCD3P28288 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.66□□□□□ -1.98
ABCD3P28288 RPL32P28-201ENST00000443577 397 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 AIG1P1-201ENST00000503376 148 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 AC016632.1-201ENST00000503994 196 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.66□□□□□ -1.98
ABCD3P28288 AC025465.4-201ENST00000513422 638 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.66□□□□□ -1.98
ABCD3P28288 AL359198.2-201ENST00000611836 194 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 AC104237.2-201ENST00000612456 443 ntBASIC2.66□□□□□ -1.98
ABCD3P28288 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ABCD3P28288 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ABCD3P28288 RNU6-227P-201ENST00000362865 103 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 U3.13-201ENST00000364804 214 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 SNORA32.2-201ENST00000384049 122 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 RNU6-1072P-201ENST00000384703 107 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 RNU6-443P-201ENST00000384780 107 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 FGF7P8-201ENST00000402994 292 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AL356776.1-201ENST00000406574 447 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AL030996.1-201ENST00000411430 235 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.65□□□□□ -1.99
ABCD3P28288 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.65□□□□□ -1.99
ABCD3P28288 AL139413.1-201ENST00000421309 217 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AL133396.1-201ENST00000432048 687 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AL031659.1-201ENST00000447075 539 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 GSTA11P-201ENST00000452866 669 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AMD1P1-201ENST00000457220 922 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AC090515.1-201ENST00000465295 476 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AP004217.1-201ENST00000480579 346 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AC018710.1-201ENST00000506509 158 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AC010486.1-201ENST00000511793 424 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 RNU6-586P-201ENST00000517265 104 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
ABCD3P28288 HSPE1P4-201ENST00000550617 308 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.65□□□□□ -1.99
ABCD3P28288 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.65□□□□□ -1.99
ABCD3P28288 MIR3672-201ENST00000584290 82 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 AL022345.1-201ENST00000607292 135 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 HMGB1P24-202ENST00000615653 685 ntBASIC2.65□□□□□ -1.99
ABCD3P28288 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ABCD3P28288 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.64□□□□□ -1.99
ABCD3P28288 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.64□□□□□ -1.99
ABCD3P28288 RNU1-35P-201ENST00000362782 153 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 Y_RNA.111-201ENST00000363248 100 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 RNU4-56P-201ENST00000364700 142 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 RNU6-831P-201ENST00000384548 107 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ABCD3P28288 RNU6-1148P-201ENST00000410992 104 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.64□□□□□ -1.99
ABCD3P28288 RPL30P16-201ENST00000419341 429 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 SNRPGP7-201ENST00000469016 106 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.64□□□□□ -1.99
ABCD3P28288 SNORA48.11-201ENST00000517015 89 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 AC087241.2-201ENST00000535801 324 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.64□□□□□ -1.99
ABCD3P28288 AL355297.2-201ENST00000604792 129 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.64□□□□□ -1.99
ABCD3P28288 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.64□□□□□ -1.99
ABCD3P28288 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ABCD3P28288 AL161431.1-201ENST00000618966 4205 ntBASIC2.64□□□□□ -1.99
ABCD3P28288 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ABCD3P28288 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ABCD3P28288 RNU6-1317P-201ENST00000364582 104 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 SNORD116-11-201ENST00000383882 92 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 MIR512-1-201ENST00000384913 84 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 SNORA26.3-201ENST00000391119 136 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 RNU6-325P-201ENST00000411132 105 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 EIF1AXP1-201ENST00000419267 435 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.63□□□□□ -1.99
ABCD3P28288 AL590556.1-201ENST00000423231 483 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 USP9YP28-201ENST00000435142 589 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.63□□□□□ -1.99
ABCD3P28288 USP9YP8-201ENST00000441913 500 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 RPS3P1-201ENST00000456781 192 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 AC103975.1-201ENST00000482506 483 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 RNU5F-2P-201ENST00000516066 82 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 AP005902.1-201ENST00000521358 186 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.63□□□□□ -1.99
ABCD3P28288 AC016256.1-201ENST00000547971 354 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 CPDP1-201ENST00000579660 283 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.63□□□□□ -1.99
ABCD3P28288 AC011712.1-201ENST00000588959 234 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.63□□□□□ -1.99
ABCD3P28288 AC009248.2-201ENST00000619826 254 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 AC090517.3-201ENST00000625170 141 ntBASIC2.63□□□□□ -1.99
ABCD3P28288 AL137790.1-201ENST00000634283 177 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms