Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL034555.1-201ENST00000604816 211 ntBASIC3.3□□□□□ -1.88
CD40P25942 AL138963.2-201ENST00000605137 226 ntBASIC3.3□□□□□ -1.88
CD40P25942 UCA1.1-201ENST00000620952 75 ntBASIC3.3□□□□□ -1.88
CD40P25942 MIR4727-201ENST00000622232 55 ntBASIC3.3□□□□□ -1.88
CD40P25942 AC012442.3-202ENST00000636742 206 ntBASIC3.3□□□□□ -1.88
CD40P25942 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.3□□□□□ -1.88
CD40P25942 MAPK10-322ENST00000641485 4530 ntBASIC3.3□□□□□ -1.88
CD40P25942 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CD40P25942 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.3□□□□□ -1.88
CD40P25942 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40P25942 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
CD40P25942 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40P25942 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CD40P25942 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40P25942 Y_RNA.64-201ENST00000362845 102 ntBASIC3.29□□□□□ -1.88
CD40P25942 RNU6-770P-201ENST00000363929 105 ntBASIC3.29□□□□□ -1.88
CD40P25942 MIR10B-201ENST00000385011 110 ntBASIC3.29□□□□□ -1.88
CD40P25942 U3.19-201ENST00000390893 196 ntBASIC3.29□□□□□ -1.88
CD40P25942 AL358075.3-201ENST00000426289 226 ntBASIC3.29□□□□□ -1.88
CD40P25942 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40P25942 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.29□□□□□ -1.88
CD40P25942 AC067942.3-201ENST00000512025 362 ntBASIC3.29□□□□□ -1.88
CD40P25942 MRPS36P2-201ENST00000512569 299 ntBASIC3.29□□□□□ -1.88
CD40P25942 AC026726.1-201ENST00000512859 601 ntBASIC3.29□□□□□ -1.88
CD40P25942 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
CD40P25942 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40P25942 MIR5187-201ENST00000583479 76 ntBASIC3.29□□□□□ -1.88
CD40P25942 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40P25942 MIR8058-201ENST00000615737 89 ntBASIC3.29□□□□□ -1.88
CD40P25942 AC005296.1-201ENST00000616145 209 ntBASIC3.29□□□□□ -1.88
CD40P25942 AC010205.1-201ENST00000616668 449 ntBASIC3.29□□□□□ -1.88
CD40P25942 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40P25942 AC130454.1-201ENST00000622948 401 ntBASIC3.29□□□□□ -1.88
CD40P25942 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40P25942 AL109809.4-201ENST00000603520 2185 ntBASIC3.29□□□□□ -1.88
CD40P25942 ZNF962P-201ENST00000443465 3140 ntBASIC3.29□□□□□ -1.88
CD40P25942 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40P25942 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD40P25942 IPO8P1-201ENST00000455509 3109 ntBASIC3.28□□□□□ -1.88
CD40P25942 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD40P25942 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD40P25942 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD40P25942 Y_RNA.19-201ENST00000362462 99 ntBASIC3.28□□□□□ -1.88
CD40P25942 RNA5SP361-201ENST00000362686 118 ntBASIC3.28□□□□□ -1.88
CD40P25942 RNU6-611P-201ENST00000384276 104 ntBASIC3.28□□□□□ -1.88
CD40P25942 RNU6-318P-201ENST00000384283 103 ntBASIC3.28□□□□□ -1.88
CD40P25942 MIR186-201ENST00000384988 86 ntBASIC3.28□□□□□ -1.88
CD40P25942 MIR670-201ENST00000390142 98 ntBASIC3.28□□□□□ -1.88
CD40P25942 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD40P25942 RNA5SP213-201ENST00000391031 106 ntBASIC3.28□□□□□ -1.88
CD40P25942 SNORD78.2-201ENST00000391076 69 ntBASIC3.28□□□□□ -1.88
CD40P25942 RNU6-159P-201ENST00000391080 106 ntBASIC3.28□□□□□ -1.88
CD40P25942 MIR208B-201ENST00000401172 77 ntBASIC3.28□□□□□ -1.88
CD40P25942 MIR1183-201ENST00000408856 89 ntBASIC3.28□□□□□ -1.88
CD40P25942 RNA5SP39-201ENST00000411245 120 ntBASIC3.28□□□□□ -1.88
CD40P25942 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD40P25942 AIMP1P2-201ENST00000425294 312 ntBASIC3.28□□□□□ -1.88
CD40P25942 AC096638.1-201ENST00000444678 216 ntBASIC3.28□□□□□ -1.88
CD40P25942 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.28□□□□□ -1.88
CD40P25942 PCNPP5-201ENST00000452246 481 ntBASIC3.28□□□□□ -1.88
CD40P25942 snoU13.14-201ENST00000459372 104 ntBASIC3.28□□□□□ -1.88
CD40P25942 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.28□□□□□ -1.88
CD40P25942 RNU1-95P-201ENST00000516357 160 ntBASIC3.28□□□□□ -1.88
CD40P25942 RNU1-128P-201ENST00000516704 160 ntBASIC3.28□□□□□ -1.88
CD40P25942 RNU6-1198P-201ENST00000516904 67 ntBASIC3.28□□□□□ -1.88
CD40P25942 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.28□□□□□ -1.88
CD40P25942 CYP4A27P-201ENST00000567218 190 ntBASIC3.28□□□□□ -1.88
CD40P25942 MIR4644-201ENST00000579929 84 ntBASIC3.28□□□□□ -1.88
CD40P25942 AC125232.2-201ENST00000592457 143 ntBASIC3.28□□□□□ -1.88
CD40P25942 AC103858.2-201ENST00000621471 543 ntBASIC3.28□□□□□ -1.88
CD40P25942 MIR8062-201ENST00000621515 85 ntBASIC3.28□□□□□ -1.88
CD40P25942 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD40P25942 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CD40P25942 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD40P25942 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CD40P25942 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD40P25942 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD40P25942 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD40P25942 Y_RNA.396-201ENST00000383949 103 ntBASIC3.27□□□□□ -1.89
CD40P25942 RNU6-926P-201ENST00000384075 107 ntBASIC3.27□□□□□ -1.89
CD40P25942 RNU1-57P-201ENST00000384491 166 ntBASIC3.27□□□□□ -1.89
CD40P25942 Y_RNA.556-201ENST00000384677 113 ntBASIC3.27□□□□□ -1.89
CD40P25942 MIR549A-201ENST00000385268 96 ntBASIC3.27□□□□□ -1.89
CD40P25942 RPS26P42-201ENST00000413485 326 ntBASIC3.27□□□□□ -1.89
CD40P25942 BX679664.1-201ENST00000434429 253 ntBASIC3.27□□□□□ -1.89
CD40P25942 AL136097.1-201ENST00000456945 913 ntBASIC3.27□□□□□ -1.89
CD40P25942 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CD40P25942 SCARNA17.1-201ENST00000516211 143 ntBASIC3.27□□□□□ -1.89
CD40P25942 SCARNA17.2-201ENST00000516334 143 ntBASIC3.27□□□□□ -1.89
CD40P25942 RNU6-1012P-201ENST00000516606 109 ntBASIC3.27□□□□□ -1.89
CD40P25942 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.27□□□□□ -1.89
CD40P25942 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.27□□□□□ -1.89
CD40P25942 AC093023.1-201ENST00000547375 507 ntBASIC3.27□□□□□ -1.89
CD40P25942 AC079598.5-201ENST00000547460 117 ntBASIC3.27□□□□□ -1.89
CD40P25942 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.27□□□□□ -1.89
CD40P25942 MIR4444-1-201ENST00000581696 74 ntBASIC3.27□□□□□ -1.89
CD40P25942 MIR4444-2-201ENST00000584390 74 ntBASIC3.27□□□□□ -1.89
CD40P25942 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
CD40P25942 AC078899.3-201ENST00000599065 212 ntBASIC3.27□□□□□ -1.89
CD40P25942 SCARNA17.4-201ENST00000614296 143 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms