Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MIR4738-201ENST00000579134 87 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 MIR3923-201ENST00000579521 83 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFSF4P23510 AC005899.2-201ENST00000584353 90 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AL117336.2-201ENST00000602435 335 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AL359757.2-201ENST00000624309 274 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AC090517.3-201ENST00000625170 141 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFSF4P23510 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TNFSF4P23510 AL513302.2-201ENST00000562313 1842 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
TNFSF4P23510 AL353743.1-202ENST00000431724 1695 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 Y_RNA.2-201ENST00000362330 96 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 snoU2_19.1-201ENST00000362361 80 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 RNU4-73P-201ENST00000363164 141 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 RNU6-1188P-201ENST00000363795 107 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 RNU6-805P-201ENST00000365643 106 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 SNORA29-201ENST00000384183 140 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 SNORD17-201ENST00000390930 237 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 MTCYBP4-201ENST00000401524 249 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 SNORA11-201ENST00000408789 128 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 USMG5P1-201ENST00000425964 177 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFSF4P23510 AL161788.1-201ENST00000441805 169 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AL353705.4-201ENST00000449661 238 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFSF4P23510 AC005741.1-201ENST00000511094 432 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 RNU6-586P-201ENST00000517265 104 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TNFSF4P23510 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.9□□□□□ -1.95
TNFSF4P23510 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFSF4P23510 FRG2DP-202ENST00000566967 323 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 MIR5696-201ENST00000578474 85 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFSF4P23510 MIR4444-1-201ENST00000581696 74 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 MIR4444-2-201ENST00000584390 74 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 MIR3922-201ENST00000585192 84 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFSF4P23510 Z98751.3-201ENST00000604447 521 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AL138963.2-201ENST00000605137 226 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AC133104.2-201ENST00000615272 193 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 HMGB1P24-202ENST00000615653 685 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 AL669831.3-213ENST00000636676 183 ntBASIC2.9□□□□□ -1.95
TNFSF4P23510 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFSF4P23510 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFSF4P23510 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFSF4P23510 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFSF4P23510 ZNF299P-201ENST00000406845 1804 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 AC069528.2-201ENST00000624849 1991 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 RNU5B-2P-201ENST00000363036 113 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 Y_RNA.490-201ENST00000384413 102 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 MIR95-201ENST00000385072 81 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 AC012306.1-201ENST00000423267 114 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFSF4P23510 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFSF4P23510 AC090515.1-201ENST00000465295 476 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 RNA5SP380-201ENST00000517190 98 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 NDUFB9P3-201ENST00000521269 501 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFSF4P23510 APOOP3-201ENST00000536787 586 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 HSPE1P20-201ENST00000538133 289 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFSF4P23510 CYP4A27P-201ENST00000567218 190 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFSF4P23510 MIR4276-201ENST00000584832 70 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 7SK.7-201ENST00000603504 247 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 AL078605.1-201ENST00000603529 500 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 AC137590.2-201ENST00000619709 240 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 AC104985.2-201ENST00000620598 500 ntBASIC2.89□□□□□ -1.95
TNFSF4P23510 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
TNFSF4P23510 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFSF4P23510 RNA5SP494-201ENST00000410653 129 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 HMGB3P2-201ENST00000411913 584 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFSF4P23510 MTCO2P27-201ENST00000420740 428 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 AC236972.2-201ENST00000434979 310 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFSF4P23510 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFSF4P23510 CENPBD1P1-201ENST00000464061 469 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 RPL7P49-201ENST00000471402 708 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 FO393415.2-201ENST00000480085 343 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 RPL7P42-201ENST00000481005 679 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 AC021146.2-201ENST00000504736 556 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 AP006245.1-201ENST00000522549 120 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 MRPS36P4-201ENST00000534436 298 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFSF4P23510 SCARNA4-201ENST00000629045 128 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.88□□□□□ -1.95
TNFSF4P23510 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFSF4P23510 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TNFSF4P23510 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFSF4P23510 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFSF4P23510 AC135776.4-201ENST00000624300 1904 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 AL355596.1-201ENST00000565399 3996 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TNFSF4P23510 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFSF4P23510 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms