Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.5□□□□□ -2.17
COL5A1P20908 RNA5SP337-201ENST00000517007 109 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU2-46P-201ENST00000517038 113 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 SUB1P1-201ENST00000524415 382 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC084851.1-201ENST00000529105 249 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.5□□□□□ -2.17
COL5A1P20908 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.5□□□□□ -2.17
COL5A1P20908 AL137100.2-201ENST00000555786 315 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC005730.3-201ENST00000583067 366 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL5A1P20908 DISC2.1-201ENST00000612827 205 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC245884.12-201ENST00000615364 59 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 uc_338.20-201ENST00000621563 178 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC024940.5-201ENST00000622889 474 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC024614.3-201ENST00000637860 256 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 ZNF519P1-201ENST00000449011 1626 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.5□□□□□ -2.17
COL5A1P20908 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL5A1P20908 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL5A1P20908 SDAD1P2-201ENST00000441308 2028 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL5A1P20908 Y_RNA.22-201ENST00000362492 102 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU6-169P-201ENST00000365336 107 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU6-882P-201ENST00000391025 103 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 SNORD115-47-201ENST00000391226 86 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RPL30P16-201ENST00000419341 429 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.5□□□□□ -2.17
COL5A1P20908 AC008850.1-201ENST00000427546 362 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 ELOCP14-201ENST00000428070 331 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 CALM2P2-201ENST00000428512 440 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 GTF2IP20-201ENST00000431663 360 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.5□□□□□ -2.17
COL5A1P20908 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.5□□□□□ -2.17
COL5A1P20908 ELOCP7-201ENST00000439968 331 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC022364.2-201ENST00000457963 554 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU7-182P-201ENST00000459009 62 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU7-63P-201ENST00000459054 62 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 HMGB1P22-201ENST00000505315 124 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL5A1P20908 LRRC34P2-201ENST00000514850 553 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNA5SP401-201ENST00000515920 127 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RNU6-1256P-201ENST00000516539 103 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 RPPH1-2P-201ENST00000516688 293 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.5□□□□□ -2.17
COL5A1P20908 ADI1P3-201ENST00000549509 470 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.5□□□□□ -2.17
COL5A1P20908 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.5□□□□□ -2.17
COL5A1P20908 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.5□□□□□ -2.17
COL5A1P20908 AC092325.1-201ENST00000566449 554 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC007363.1-201ENST00000604736 620 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC012443.1-201ENST00000605605 231 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC104458.1-201ENST00000608243 463 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 AC139792.3-201ENST00000623525 224 ntBASIC1.5□□□□□ -2.17
COL5A1P20908 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.49□□□□□ -2.17
COL5A1P20908 AL354685.2-201ENST00000448218 1447 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.49□□□□□ -2.17
COL5A1P20908 AC090740.1-201ENST00000623193 2262 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 MTND5P17-201ENST00000418405 1603 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.49□□□□□ -2.17
COL5A1P20908 RNU6-82P-201ENST00000363970 107 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 RNU6-960P-201ENST00000364056 120 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 RNU1-93P-201ENST00000364704 169 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 RNU6-282P-201ENST00000365357 103 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 Y_RNA.367-201ENST00000365544 101 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 MIR598-201ENST00000384868 97 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 MT-TL1-201ENST00000386347 75 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 SNORA40C-201ENST00000391285 128 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL359634.1-202ENST00000404721 284 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 CIR1P3-201ENST00000405137 479 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 Y_RNA.604-201ENST00000410574 102 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 RNA5SP111-201ENST00000411386 101 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 OR51A5P-201ENST00000415429 942 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL353193.1-201ENST00000421444 268 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.49□□□□□ -2.17
COL5A1P20908 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.49□□□□□ -2.17
COL5A1P20908 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.49□□□□□ -2.17
COL5A1P20908 CALM1P1-201ENST00000442082 433 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.49□□□□□ -2.17
COL5A1P20908 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.49□□□□□ -2.17
COL5A1P20908 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.49□□□□□ -2.17
COL5A1P20908 C1DP4-201ENST00000455429 424 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.49□□□□□ -2.17
COL5A1P20908 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.49□□□□□ -2.17
COL5A1P20908 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.49□□□□□ -2.17
COL5A1P20908 RPS29P15-201ENST00000458329 171 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AC083798.1-201ENST00000472671 131 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AC022493.1-201ENST00000492984 337 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AC116353.2-201ENST00000505332 712 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AC104806.1-201ENST00000508720 308 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 SNORA70.16-201ENST00000516390 95 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 Y_RNA.682-201ENST00000516457 100 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 RNU6-1223P-201ENST00000517124 104 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.49□□□□□ -2.17
COL5A1P20908 BNIP3P9-201ENST00000603714 553 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AC021646.1-201ENST00000605469 484 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL355073.2-201ENST00000612106 557 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AL365204.3-201ENST00000612448 685 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 AP001486.3-201ENST00000615334 372 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.49□□□□□ -2.17
COL5A1P20908 MIR3688-2-201ENST00000636963 87 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms