Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU6-527P-201ENST00000363425 104 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 Y_RNA.399-201ENST00000383955 105 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 RNU6-517P-201ENST00000384362 110 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 SNORD70.1-201ENST00000391007 85 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 Y_RNA.582-201ENST00000391023 95 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 CBX3P9-201ENST00000402326 552 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.95□□□□□ -2.1
XRCC1P18887 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.95□□□□□ -2.1
XRCC1P18887 MTCO2P16-201ENST00000436962 677 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.95□□□□□ -2.1
XRCC1P18887 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.95□□□□□ -2.1
XRCC1P18887 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.95□□□□□ -2.1
XRCC1P18887 PRPS1P1-201ENST00000445305 876 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 SNRPFP3-201ENST00000457792 225 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AL121594.1-201ENST00000475906 575 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.95□□□□□ -2.1
XRCC1P18887 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.95□□□□□ -2.1
XRCC1P18887 AC079140.3-201ENST00000511111 550 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AC006362.1-201ENST00000567392 174 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AGGF1P4-201ENST00000568249 801 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AL136363.2-201ENST00000604173 851 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 NDUFA8P1-201ENST00000605525 367 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 RN7SKP299-201ENST00000606679 301 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AC245008.1-201ENST00000608123 476 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AC009509.4-201ENST00000619202 509 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 MIR7843-201ENST00000622274 79 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 DUXAP9-208ENST00000622815 614 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.95□□□□□ -2.1
XRCC1P18887 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
XRCC1P18887 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
XRCC1P18887 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.94□□□□□ -2.1
XRCC1P18887 Y_RNA.159-201ENST00000363674 87 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RNU6-1127P-201ENST00000384580 107 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RNU6-1140P-201ENST00000410517 106 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AC007969.2-201ENST00000441891 191 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AL360221.1-201ENST00000445989 335 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.94□□□□□ -2.1
XRCC1P18887 FDX1P2-201ENST00000450769 375 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 SCARNA18-201ENST00000459004 134 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RNU6-377P-201ENST00000515965 102 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RNU2-69P-201ENST00000516061 100 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RNA5SP182-201ENST00000516064 82 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RN7SKP219-201ENST00000516825 296 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AP005435.4-201ENST00000529514 284 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AL137161.1-201ENST00000532231 390 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AC023050.3-201ENST00000541142 333 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 ANP32BP3-201ENST00000559213 706 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 MIR3126-201ENST00000577443 74 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 RSL24D1P11-201ENST00000591045 491 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AC008749.1-201ENST00000597650 306 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.94□□□□□ -2.1
XRCC1P18887 AL670379.2-201ENST00000604983 252 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 Z82243.1-201ENST00000609432 473 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 AL159153.1-201ENST00000619688 317 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.94□□□□□ -2.1
XRCC1P18887 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
XRCC1P18887 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.94□□□□□ -2.1
XRCC1P18887 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
XRCC1P18887 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
XRCC1P18887 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
XRCC1P18887 Y_RNA.296-201ENST00000364930 108 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 SNORA25B-201ENST00000365507 128 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 RNU6-1042P-201ENST00000384204 107 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 RNU6-903P-201ENST00000391270 109 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 RNU6-1245P-201ENST00000411130 106 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
XRCC1P18887 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.93□□□□□ -2.1
XRCC1P18887 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.93□□□□□ -2.1
XRCC1P18887 AC002486.1-201ENST00000435098 391 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.93□□□□□ -2.1
XRCC1P18887 RNU7-63P-201ENST00000459054 62 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.93□□□□□ -2.1
XRCC1P18887 RN7SKP256-201ENST00000517201 314 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
XRCC1P18887 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.93□□□□□ -2.1
XRCC1P18887 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.93□□□□□ -2.1
XRCC1P18887 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.93□□□□□ -2.1
XRCC1P18887 AC093249.1-201ENST00000567049 203 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.93□□□□□ -2.1
XRCC1P18887 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.93□□□□□ -2.1
XRCC1P18887 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.93□□□□□ -2.1
XRCC1P18887 AC091805.2-201ENST00000603848 235 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 AC091932.3-201ENST00000624223 323 ntBASIC1.93□□□□□ -2.1
XRCC1P18887 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
XRCC1P18887 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
XRCC1P18887 RNU6-212P-201ENST00000362642 104 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 RNU6-1222P-201ENST00000384615 107 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 MIR29B2-201ENST00000385055 81 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 U8.13-201ENST00000390842 128 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 SNORA16.2-201ENST00000390991 127 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AIMP1P2-201ENST00000425294 312 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms