Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
HLA-DOBP13765 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DOBP13765 AC010889.1-201ENST00000566193 2666 ntBASIC2.54□□□□□ -2
HLA-DOBP13765 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOBP13765 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOBP13765 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DOBP13765 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 Y_RNA.2-201ENST00000362330 96 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 RNU6-227P-201ENST00000362865 103 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 SNORD42.2-201ENST00000365570 69 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 Y_RNA.394-201ENST00000383942 103 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 Y_RNA.473-201ENST00000384333 102 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 RNU6-843P-201ENST00000384454 104 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 SNORA44-201ENST00000384584 132 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 RNU6-748P-201ENST00000384648 107 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 RNU6-19P-201ENST00000384718 107 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 MIR521-1-201ENST00000384902 87 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AL591034.2-201ENST00000402839 359 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOBP13765 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DOBP13765 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOBP13765 Z82205.1-201ENST00000428456 297 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AC005534.2-201ENST00000431047 433 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AL139132.1-201ENST00000431587 344 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DOBP13765 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DOBP13765 S100A11P2-201ENST00000467589 312 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DOBP13765 AC083906.5-201ENST00000503722 328 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOBP13765 RNU6-1153P-201ENST00000516760 105 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOBP13765 AC107016.2-201ENST00000547968 190 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOBP13765 AL161756.2-201ENST00000604597 246 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AC019159.1-201ENST00000605094 187 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 AL080274.1-201ENST00000605565 220 ntBASIC2.53□□□□□ -2
HLA-DOBP13765 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DOBP13765 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
HLA-DOBP13765 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DOBP13765 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DOBP13765 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DOBP13765 SNORD56.1-201ENST00000362913 68 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 RNU1-140P-201ENST00000365040 165 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 RNU6-1040P-201ENST00000383974 107 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 RNU6-890P-201ENST00000384121 107 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 SNORA18.3-201ENST00000384122 132 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 RNU6-851P-201ENST00000384565 107 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 MIR491-201ENST00000384877 84 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 MIR128-1-201ENST00000384921 82 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 MIR767-201ENST00000390228 109 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 SNORA48.2-201ENST00000390926 124 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 UBA52P6-201ENST00000399822 382 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DOBP13765 RNA5SP344-201ENST00000411081 104 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 EIF4EP2-201ENST00000422816 654 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DOBP13765 RPS3AP12-201ENST00000443616 753 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DOBP13765 AL441985.1-201ENST00000457727 251 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 RPS29P27-201ENST00000463711 170 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC107626.1-201ENST00000471084 183 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC097462.2-201ENST00000504623 481 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC091826.1-201ENST00000514065 313 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 SNORA31.23-201ENST00000517219 133 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 MIR3200-201ENST00000580767 85 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 MIR4273-201ENST00000582824 84 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AP001836.1-201ENST00000604675 523 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AL356157.2-201ENST00000605122 111 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC004832.5-201ENST00000608677 401 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC097372.5-201ENST00000623665 376 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC134503.1-201ENST00000633048 54 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC241585.2-209ENST00000638217 143 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
HLA-DOBP13765 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
HLA-DOBP13765 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOBP13765 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC096644.4-201ENST00000563417 2912 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOBP13765 Y_RNA.128-201ENST00000363391 112 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 RNU6-799P-201ENST00000363567 107 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 Y_RNA.197-201ENST00000364004 102 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 RNA5SP139-201ENST00000364340 117 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 Y_RNA.395-201ENST00000383945 109 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 SNORA41-201ENST00000384675 132 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 RNU1-101P-201ENST00000391171 127 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms