Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RN7SKP88-201ENST00000516847 250 ntBASIC-0.72□□□□□ -2.52
VCANP13611 RPL23AP91-201ENST00000569211 455 ntBASIC-0.72□□□□□ -2.52
VCANP13611 AL031176.1-201ENST00000604554 466 ntBASIC-0.72□□□□□ -2.52
VCANP13611 uc_338.28-201ENST00000612082 187 ntBASIC-0.72□□□□□ -2.52
VCANP13611 7SK.8-201ENST00000612110 250 ntBASIC-0.72□□□□□ -2.52
VCANP13611 7SK.11-201ENST00000615477 250 ntBASIC-0.72□□□□□ -2.52
VCANP13611 7SK.13-201ENST00000622040 250 ntBASIC-0.72□□□□□ -2.52
VCANP13611 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
VCANP13611 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
VCANP13611 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.72□□□□□ -2.52
VCANP13611 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.72□□□□□ -2.52
VCANP13611 AC112220.2-201ENST00000605513 533 ntBASIC-0.72□□□□□ -2.52
VCANP13611 USP9YP29-201ENST00000445112 563 ntBASIC-0.73□□□□□ -2.53
VCANP13611 AC022616.3-201ENST00000523940 148 ntBASIC-0.73□□□□□ -2.53
VCANP13611 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.73□□□□□ -2.53
VCANP13611 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.73□□□□□ -2.53
VCANP13611 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.73□□□□□ -2.53
VCANP13611 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.73□□□□□ -2.53
VCANP13611 AC092268.1-201ENST00000342691 405 ntBASIC-0.73□□□□□ -2.53
VCANP13611 MIR302D-201ENST00000362275 68 ntBASIC-0.73□□□□□ -2.53
VCANP13611 RNU6-815P-201ENST00000384080 113 ntBASIC-0.73□□□□□ -2.53
VCANP13611 RNU6-950P-201ENST00000384651 107 ntBASIC-0.73□□□□□ -2.53
VCANP13611 MTND1P14-201ENST00000427400 950 ntBASIC-0.73□□□□□ -2.53
VCANP13611 RNU6-274P-201ENST00000459566 107 ntBASIC-0.73□□□□□ -2.53
VCANP13611 RN7SKP164-201ENST00000516138 266 ntBASIC-0.73□□□□□ -2.53
VCANP13611 AC020923.1-201ENST00000624021 917 ntBASIC-0.73□□□□□ -2.53
VCANP13611 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.73□□□□□ -2.53
VCANP13611 AL606662.1-201ENST00000445763 553 ntBASIC-0.73□□□□□ -2.53
VCANP13611 AC027104.1-201ENST00000563702 681 ntBASIC-0.73□□□□□ -2.53
VCANP13611 AL356432.3-201ENST00000568952 465 ntBASIC-0.73□□□□□ -2.53
VCANP13611 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.73□□□□□ -2.53
VCANP13611 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.73□□□□□ -2.53
VCANP13611 RPL21P32-201ENST00000419877 477 ntBASIC-0.74□□□□□ -2.53
VCANP13611 AC015908.1-201ENST00000478739 476 ntBASIC-0.74□□□□□ -2.53
VCANP13611 AC025465.3-201ENST00000510570 311 ntBASIC-0.74□□□□□ -2.53
VCANP13611 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.74□□□□□ -2.53
VCANP13611 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.74□□□□□ -2.53
VCANP13611 AC244098.3-201ENST00000424803 96 ntBASIC-0.74□□□□□ -2.53
VCANP13611 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.74□□□□□ -2.53
VCANP13611 MIR767-201ENST00000390228 109 ntBASIC-0.74□□□□□ -2.53
VCANP13611 C1DP2-201ENST00000418167 426 ntBASIC-0.74□□□□□ -2.53
VCANP13611 AC002381.1-201ENST00000447049 280 ntBASIC-0.74□□□□□ -2.53
VCANP13611 C1DP4-201ENST00000455429 424 ntBASIC-0.74□□□□□ -2.53
VCANP13611 MIR892C-201ENST00000516410 77 ntBASIC-0.74□□□□□ -2.53
VCANP13611 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.74□□□□□ -2.53
VCANP13611 MIR4743-201ENST00000584576 69 ntBASIC-0.74□□□□□ -2.53
VCANP13611 SNORD114-14-201ENST00000362723 75 ntBASIC-0.75□□□□□ -2.53
VCANP13611 SNORD114-11-201ENST00000363738 75 ntBASIC-0.75□□□□□ -2.53
VCANP13611 ARL5AP1-201ENST00000418991 388 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AL589872.1-201ENST00000426602 288 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AC233266.1-201ENST00000454518 96 ntBASIC-0.75□□□□□ -2.53
VCANP13611 RNU7-56P-201ENST00000458744 62 ntBASIC-0.75□□□□□ -2.53
VCANP13611 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.75□□□□□ -2.53
VCANP13611 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.75□□□□□ -2.53
VCANP13611 AC111000.5-201ENST00000506559 1178 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AC106038.2-201ENST00000520706 568 ntBASIC-0.75□□□□□ -2.53
VCANP13611 MIR4263-201ENST00000584745 83 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AC112220.3-201ENST00000605502 502 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AC242852.1-201ENST00000612151 96 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AC244015.1-201ENST00000622301 99 ntBASIC-0.75□□□□□ -2.53
VCANP13611 RNA5SP125-201ENST00000364843 120 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AL109913.1-201ENST00000421173 514 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.75□□□□□ -2.53
VCANP13611 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.75□□□□□ -2.53
VCANP13611 HMGB1P22-201ENST00000505315 124 ntBASIC-0.75□□□□□ -2.53
VCANP13611 SNORA31.10-201ENST00000516482 106 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AL009028.1-201ENST00000604895 802 ntBASIC-0.75□□□□□ -2.53
VCANP13611 AC105148.1-201ENST00000604961 409 ntBASIC-0.75□□□□□ -2.53
VCANP13611 RNU6-116P-201ENST00000384042 109 ntBASIC-0.76□□□□□ -2.53
VCANP13611 MIR593-201ENST00000384856 100 ntBASIC-0.76□□□□□ -2.53
VCANP13611 AL157786.1-207ENST00000627771 695 ntBASIC-0.76□□□□□ -2.53
VCANP13611 MTND4P4-201ENST00000439033 1366 ntBASIC-0.76□□□□□ -2.53
VCANP13611 SNORD114-25-201ENST00000363742 72 ntBASIC-0.76□□□□□ -2.53
VCANP13611 AC063976.4-201ENST00000421971 163 ntBASIC-0.76□□□□□ -2.53
VCANP13611 AC139712.2-201ENST00000424302 339 ntBASIC-0.76□□□□□ -2.53
VCANP13611 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.76□□□□□ -2.53
VCANP13611 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.76□□□□□ -2.53
VCANP13611 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.76□□□□□ -2.53
VCANP13611 AC012435.1-202ENST00000568772 240 ntBASIC-0.76□□□□□ -2.53
VCANP13611 MIR5094-201ENST00000578766 85 ntBASIC-0.76□□□□□ -2.53
VCANP13611 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.76□□□□□ -2.53
VCANP13611 MIR1267-201ENST00000408723 78 ntBASIC-0.76□□□□□ -2.53
VCANP13611 AL365496.1-201ENST00000426885 215 ntBASIC-0.76□□□□□ -2.53
VCANP13611 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.76□□□□□ -2.53
VCANP13611 AC006026.2-201ENST00000457376 180 ntBASIC-0.76□□□□□ -2.53
VCANP13611 RNU6-983P-201ENST00000516004 103 ntBASIC-0.76□□□□□ -2.53
VCANP13611 RNA5SP291-201ENST00000517222 105 ntBASIC-0.76□□□□□ -2.53
VCANP13611 SNORD115-2-201ENST00000362842 82 ntBASIC-0.77□□□□□ -2.53
VCANP13611 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.77□□□□□ -2.53
VCANP13611 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.77□□□□□ -2.53
VCANP13611 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.77□□□□□ -2.53
VCANP13611 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC-0.77□□□□□ -2.53
VCANP13611 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.77□□□□□ -2.53
VCANP13611 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.77□□□□□ -2.53
VCANP13611 AL353765.1-201ENST00000605514 183 ntBASIC-0.77□□□□□ -2.53
VCANP13611 AC092125.1-201ENST00000562568 1995 ntBASIC-0.77□□□□□ -2.53
VCANP13611 BTF3P8-201ENST00000414577 526 ntBASIC-0.77□□□□□ -2.53
VCANP13611 ELOCP30-201ENST00000447108 299 ntBASIC-0.77□□□□□ -2.53
VCANP13611 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.77□□□□□ -2.53
VCANP13611 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms