Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL606490.9-201ENST00000603331 271 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 SNORA43.4-201ENST00000629559 138 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 MIR3529-201ENST00000637713 78 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 PWAR6-201ENST00000552334 4618 ntBASIC3.62□□□□□ -1.83
COL6A2P12110 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.62□□□□□ -1.83
COL6A2P12110 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.62□□□□□ -1.83
COL6A2P12110 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL6A2P12110 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL6A2P12110 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
COL6A2P12110 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.61□□□□□ -1.83
COL6A2P12110 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL6A2P12110 RNU6-137P-201ENST00000363680 108 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.61□□□□□ -1.83
COL6A2P12110 Y_RNA.439-201ENST00000384119 94 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 SNORA29-201ENST00000384183 140 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 RNU6-1026P-201ENST00000384465 108 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 Y_RNA.552-201ENST00000384665 112 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 MIR153-2-201ENST00000385225 87 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
COL6A2P12110 SNORD115-46-201ENST00000390982 71 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 U3.39-201ENST00000408569 239 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 RNA5SP390-201ENST00000410191 113 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 RN7SKP61-201ENST00000410642 295 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AL591419.1-201ENST00000427423 339 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 ARL5AP4-201ENST00000430731 512 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.61□□□□□ -1.83
COL6A2P12110 Z98949.2-201ENST00000440996 144 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.61□□□□□ -1.83
COL6A2P12110 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.61□□□□□ -1.83
COL6A2P12110 MED28P2-201ENST00000475771 317 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 TRBVB-201ENST00000477100 408 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AP001025.1-201ENST00000486139 332 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AF186996.7-201ENST00000492781 209 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.61□□□□□ -1.83
COL6A2P12110 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 Y_RNA.680-201ENST00000516441 93 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 RNU6-1012P-201ENST00000516606 109 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.61□□□□□ -1.83
COL6A2P12110 MIR4429-201ENST00000580105 73 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 MIR5187-201ENST00000583479 76 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 RNU1-30P-201ENST00000606575 163 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.61□□□□□ -1.83
COL6A2P12110 AL138880.2-201ENST00000616214 239 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AC137590.2-201ENST00000619709 240 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AC073308.1-201ENST00000623696 305 ntBASIC3.61□□□□□ -1.83
COL6A2P12110 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
COL6A2P12110 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.61□□□□□ -1.83
COL6A2P12110 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
COL6A2P12110 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL6A2P12110 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
COL6A2P12110 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.6□□□□□ -1.83
COL6A2P12110 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL6A2P12110 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL6A2P12110 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL6A2P12110 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL6A2P12110 RNU6-858P-201ENST00000362436 107 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 RNU6-1301P-201ENST00000362724 104 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 MT-TR-201ENST00000387439 65 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 RNA5SP213-201ENST00000391031 106 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 RNU6-1093P-201ENST00000391194 107 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 RNU1-139P-201ENST00000391307 165 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.6□□□□□ -1.83
COL6A2P12110 RPL23AP82-202ENST00000427528 469 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 AC078809.1-201ENST00000427601 140 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 AC087477.1-201ENST00000465747 340 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 MTND1P19-201ENST00000511780 315 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 RNU6-1023P-201ENST00000516137 106 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 RNU6-581P-201ENST00000516214 105 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 AP006245.1-201ENST00000522549 120 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.6□□□□□ -1.83
COL6A2P12110 AC006199.1-201ENST00000548728 219 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 TGIF1P1-201ENST00000558095 802 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.6□□□□□ -1.83
COL6A2P12110 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.6□□□□□ -1.83
COL6A2P12110 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.6□□□□□ -1.83
COL6A2P12110 AC096772.1-201ENST00000609146 564 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 MIR6875-201ENST00000617506 72 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL6A2P12110 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
COL6A2P12110 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL6A2P12110 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL6A2P12110 ADAM3A-203ENST00000461344 2157 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 AC068647.1-201ENST00000489539 2265 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
COL6A2P12110 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL6A2P12110 RNU6-212P-201ENST00000362642 104 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 Y_RNA.478-201ENST00000384358 107 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 MIR544A-201ENST00000384855 91 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
COL6A2P12110 RNU6-1203P-201ENST00000410703 110 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 RNU2-38P-201ENST00000410856 79 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.59□□□□□ -1.83
COL6A2P12110 EIF1P2-201ENST00000428233 350 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.59□□□□□ -1.83
COL6A2P12110 AL714022.1-201ENST00000439897 151 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 AC016700.2-201ENST00000446011 156 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms