Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 MIR548B-201ENST00000385247 97 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 RNU6-1000P-201ENST00000391066 106 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 MIR1267-201ENST00000408723 78 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AC004965.1-201ENST00000413033 213 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.78□□□□□ -2.28
UBBP0CG47 AP1B1P2-201ENST00000416196 106 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 BTF3P4-201ENST00000418852 495 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
UBBP0CG47 CALM2P2-201ENST00000428512 440 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.78□□□□□ -2.28
UBBP0CG47 AC245047.4-201ENST00000433189 144 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 JTBP1-201ENST00000441314 247 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 MTND3P1-201ENST00000441336 220 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 PRPS1P1-201ENST00000445305 876 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.78□□□□□ -2.28
UBBP0CG47 snoU13.23-201ENST00000458863 104 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.78□□□□□ -2.28
UBBP0CG47 AC134050.1-201ENST00000495088 933 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.78□□□□□ -2.28
UBBP0CG47 RNU5F-2P-201ENST00000516066 82 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.78□□□□□ -2.28
UBBP0CG47 AC015688.6-201ENST00000577737 104 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 MIR548AC-201ENST00000585049 88 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AC018889.1-201ENST00000605372 397 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AC004492.1-201ENST00000607036 742 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AC104073.3-201ENST00000610942 955 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 RMST_4.1-201ENST00000616886 107 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 FRG1KP-201ENST00000623592 341 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 AL138960.2-201ENST00000625145 535 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.78□□□□□ -2.28
UBBP0CG47 AL391987.6-201ENST00000305671 199 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 RNU4-15P-201ENST00000362613 141 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 RNU1-22P-201ENST00000363334 158 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 RNU6-1285P-201ENST00000363480 105 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 RNU6-26P-201ENST00000383985 107 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 RNU6-757P-201ENST00000410334 100 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.77□□□□□ -2.29
UBBP0CG47 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UBBP0CG47 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.77□□□□□ -2.29
UBBP0CG47 AC108667.1-201ENST00000428618 249 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 RPS27P1-201ENST00000450552 247 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AL122001.1-201ENST00000457027 370 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AC108210.2-201ENST00000503681 201 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AC104806.1-201ENST00000508720 308 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 RNU2-10P-201ENST00000516375 211 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AC022616.6-201ENST00000520479 119 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 MTND2P7-201ENST00000521337 640 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 CENPUP1-201ENST00000526649 1202 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.77□□□□□ -2.29
UBBP0CG47 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.77□□□□□ -2.29
UBBP0CG47 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.77□□□□□ -2.29
UBBP0CG47 AL353778.1-201ENST00000603149 408 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AC012409.4-201ENST00000612923 249 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AP000484.1-201ENST00000620067 1252 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AC007792.1-201ENST00000623023 402 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 AC120349.3-201ENST00000624377 529 ntBASIC0.77□□□□□ -2.29
UBBP0CG47 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UBBP0CG47 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.77□□□□□ -2.29
UBBP0CG47 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
UBBP0CG47 RNU6-414P-201ENST00000363705 104 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 RNU6-931P-201ENST00000363850 107 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 RNU6-371P-201ENST00000364283 108 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 SNORA29-201ENST00000384183 140 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 SNORA12-201ENST00000391162 147 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.76□□□□□ -2.29
UBBP0CG47 AC099677.2-201ENST00000436385 175 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 FTH1P25-201ENST00000447665 469 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.76□□□□□ -2.29
UBBP0CG47 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.76□□□□□ -2.29
UBBP0CG47 RNA5SP490-201ENST00000517141 136 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 MTATP6P15-201ENST00000527233 835 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 MIR5094-201ENST00000578766 85 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AC112187.2-201ENST00000604345 283 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AL158042.1-201ENST00000605338 460 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AP000654.2-201ENST00000605633 586 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AC025754.2-201ENST00000606491 432 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
UBBP0CG47 AL359547.2-201ENST00000615810 418 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AL353997.5-201ENST00000618886 171 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AC130454.1-201ENST00000622948 401 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 AC004808.1-201ENST00000627671 721 ntBASIC0.76□□□□□ -2.29
UBBP0CG47 MIR378A-201ENST00000362177 66 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 SNORD33-201ENST00000362761 85 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 RNU6-1179P-201ENST00000384667 107 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 MIR532-201ENST00000385025 91 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 RAP1BP3-201ENST00000407180 549 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 RNU2-3P-201ENST00000410144 191 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 RN7SKP61-201ENST00000410642 295 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.75□□□□□ -2.29
UBBP0CG47 AL589872.1-201ENST00000426602 288 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 AL365400.1-201ENST00000431854 640 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 MTND5P2-201ENST00000442927 1142 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.75□□□□□ -2.29
UBBP0CG47 AC012308.1-201ENST00000451232 178 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 ART2BP-201ENST00000453501 499 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.75□□□□□ -2.29
UBBP0CG47 AL049829.1-201ENST00000465411 156 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms