Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AP003181.2-201ENST00000528941 181 ntBASIC1.1□□□□□ -2.23
COL4A2P08572 BNIP3P6-201ENST00000549284 499 ntBASIC1.1□□□□□ -2.23
COL4A2P08572 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A2P08572 AL139286.2-201ENST00000606838 396 ntBASIC1.1□□□□□ -2.23
COL4A2P08572 AC108747.1-201ENST00000609508 535 ntBASIC1.1□□□□□ -2.23
COL4A2P08572 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A2P08572 MIR3529-201ENST00000637713 78 ntBASIC1.1□□□□□ -2.23
COL4A2P08572 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.1□□□□□ -2.23
COL4A2P08572 Y_RNA.30-201ENST00000362572 97 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
COL4A2P08572 Y_RNA.608-201ENST00000410647 95 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 RNU2-32P-201ENST00000411193 191 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 AC016831.2-201ENST00000417179 352 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 AL353621.1-201ENST00000418219 243 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 AL593851.1-201ENST00000426171 157 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.09□□□□□ -2.23
COL4A2P08572 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC015922.2-201ENST00000435593 184 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.09□□□□□ -2.23
COL4A2P08572 RNU2-53P-201ENST00000516257 147 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 RNU6-586P-201ENST00000517265 104 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC022616.6-201ENST00000520479 119 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 OR5B19P-201ENST00000531766 928 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC136619.2-201ENST00000563361 631 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 MIR5697-201ENST00000578045 78 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.09□□□□□ -2.23
COL4A2P08572 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.09□□□□□ -2.23
COL4A2P08572 AL109918.3-201ENST00000603072 338 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 SNRPGP17-201ENST00000603780 214 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 AL138889.2-201ENST00000603883 242 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 SDR42E1P4-201ENST00000620894 481 ntBASIC1.09□□□□□ -2.23
COL4A2P08572 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
COL4A2P08572 AC245060.5-201ENST00000610778 3293 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 RNU6-843P-201ENST00000384454 104 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 RNU6-1179P-201ENST00000384667 107 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 Y_RNA.560-201ENST00000384689 102 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 CISD1P1-201ENST00000393907 327 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 HMGN2P39-201ENST00000398005 273 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.09□□□□□ -2.24
COL4A2P08572 RPL21P90-201ENST00000415692 466 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 ELOCP4-201ENST00000420090 333 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 XKRYP1-201ENST00000423438 492 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AC008267.5-201ENST00000424928 265 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 XKRYP2-201ENST00000432915 492 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 MTND5P2-201ENST00000442927 1142 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 MTND1P12-201ENST00000455231 147 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 MTCO2P29-201ENST00000465212 189 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AC011005.2-201ENST00000487324 359 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.09□□□□□ -2.24
COL4A2P08572 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.09□□□□□ -2.24
COL4A2P08572 BNIP3P39-201ENST00000601077 554 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AC098614.4-201ENST00000607601 462 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AC108706.1-201ENST00000611053 297 ntBASIC1.09□□□□□ -2.24
COL4A2P08572 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.08□□□□□ -2.24
COL4A2P08572 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.08□□□□□ -2.24
COL4A2P08572 HAUS6P2-201ENST00000433254 2404 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RNU1-62P-201ENST00000362599 164 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RNU1-72P-201ENST00000362976 153 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RNU5F-7P-201ENST00000363696 115 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RNU6-546P-201ENST00000383991 107 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RNU5A-2P-201ENST00000384337 116 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RNU11-3P-201ENST00000391111 133 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RNU2-23P-201ENST00000410545 195 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AL356379.1-201ENST00000414105 126 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A2P08572 Z99497.1-201ENST00000421282 135 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A2P08572 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A2P08572 GPM6BP3-201ENST00000442797 145 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 RPL23AP6-201ENST00000446637 472 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AL606517.1-201ENST00000446914 387 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A2P08572 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.08□□□□□ -2.24
COL4A2P08572 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A2P08572 HSBP1P1-201ENST00000555205 166 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AC025678.1-201ENST00000567861 338 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 MIR4714-201ENST00000580728 77 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AC245884.10-201ENST00000597355 337 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AL031274.2-201ENST00000599419 203 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AL353778.1-201ENST00000603149 408 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 NDUFA8P1-201ENST00000605525 367 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AL136370.1-201ENST00000608166 691 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AC122133.1-201ENST00000613964 233 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AL773524.1-201ENST00000614065 229 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 MIR7844-201ENST00000616161 122 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AC007671.2-201ENST00000637344 619 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 AC008555.8-201ENST00000623602 2168 ntBASIC1.08□□□□□ -2.24
COL4A2P08572 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL4A2P08572 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL4A2P08572 RNU6-1210P-201ENST00000363775 107 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 RNU4-1-201ENST00000363925 141 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 RNU6-533P-201ENST00000384144 107 ntBASIC1.07□□□□□ -2.24
COL4A2P08572 MIR558-201ENST00000384920 94 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms