Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORD56.1-201ENST00000362913 68 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 SNORD114-27-201ENST00000363766 70 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 RNY4P16-201ENST00000364768 94 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 Y_RNA.332-201ENST00000365271 113 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 RNU6-1000P-201ENST00000391066 106 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 RPS3AP36-201ENST00000398190 775 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 RPS20P2-201ENST00000402520 389 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 MIR1267-201ENST00000408723 78 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AC139712.2-201ENST00000424302 339 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AL353777.1-201ENST00000425552 326 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AL135790.2-201ENST00000437701 267 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 RPL26P26-201ENST00000480251 434 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 MTCO3P9-201ENST00000506989 781 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 RPL21P5-201ENST00000554662 472 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 MIR548AC-201ENST00000585049 88 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 DEFB131E-202ENST00000602581 683 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AP000654.2-201ENST00000605633 586 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AL359547.2-201ENST00000615810 418 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AC107308.1-201ENST00000615897 301 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 MIR8063-201ENST00000621930 81 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 OR4G3P-201ENST00000633500 913 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AC233981.2-201ENST00000611524 1614 ntBASIC0.97□□□□□ -2.25
HLA-DQB2P05538 AL445523.1-201ENST00000451184 1362 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HLA-DQB2P05538 RNU6-414P-201ENST00000363705 104 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 SNORD32B-201ENST00000364460 84 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 SNORD1A-201ENST00000364968 72 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 RNU6-1080P-201ENST00000383982 107 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AL357139.1-201ENST00000407792 426 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 RPL22P18-201ENST00000417197 377 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DQB2P05538 MTND4P20-201ENST00000424125 869 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DQB2P05538 JTBP1-201ENST00000441314 247 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 MTND3P1-201ENST00000441336 220 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AC007969.2-201ENST00000441891 191 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 KATNBL1P3-201ENST00000443475 909 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DQB2P05538 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AC108078.1-201ENST00000508073 725 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 MIR449C-201ENST00000516047 92 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AL158032.1-201ENST00000605401 106 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 U6.42-201ENST00000618440 107 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AL121890.5-201ENST00000620848 304 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 RMST_7.1-201ENST00000621935 268 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AP002782.1-201ENST00000623107 614 ntBASIC0.96□□□□□ -2.26
HLA-DQB2P05538 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.96□□□□□ -2.26
HLA-DQB2P05538 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DQB2P05538 RNY1P10-201ENST00000363268 113 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 MIR578-201ENST00000384828 96 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 C8orf59P1-201ENST00000429930 303 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 MTND1P32-201ENST00000433043 938 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 AC027119.1-201ENST00000440877 241 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 AL122001.1-201ENST00000457027 370 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 RPL30P7-201ENST00000479312 323 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.95□□□□□ -2.26
HLA-DQB2P05538 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.95□□□□□ -2.26
HLA-DQB2P05538 MTND2P33-201ENST00000506452 1031 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 SNORA3.4-201ENST00000515969 96 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 MTATP6P15-201ENST00000527233 835 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.95□□□□□ -2.26
HLA-DQB2P05538 MIR5094-201ENST00000578766 85 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 AC013244.3-201ENST00000605614 388 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HLA-DQB2P05538 MTND4P16-201ENST00000466108 1367 ntBASIC0.95□□□□□ -2.26
HLA-DQB2P05538 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 MIR340-201ENST00000362125 95 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 MIR618-201ENST00000385287 98 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AL590556.1-201ENST00000423231 483 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AL589872.1-201ENST00000426602 288 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 MTND1P30-201ENST00000441241 901 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 RPL39P29-201ENST00000447779 157 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 RPS27P1-201ENST00000450552 247 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 MTND1P12-201ENST00000455231 147 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 RNA5SP490-201ENST00000517141 136 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC011979.2-201ENST00000527568 352 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 MIR3118-1-201ENST00000581787 76 ntBASIC0.94□□□□□ -2.26
HLA-DQB2P05538 AC112187.2-201ENST00000604345 283 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms