Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQA1P01909 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 RNA5SP276-201ENST00000362580 94 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 RNU6-1159P-201ENST00000362933 107 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 RNU6-546P-201ENST00000383991 107 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 MIR1262-201ENST00000408276 93 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 RNU2-29P-201ENST00000410423 189 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 RNU6-293P-201ENST00000411259 106 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC027124.2-201ENST00000428249 105 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AL137159.1-201ENST00000452808 512 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 SNORA59A-201ENST00000459326 152 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 HMGB1P35-201ENST00000503360 598 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC009646.1-201ENST00000510455 318 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 Y_RNA.688-201ENST00000516565 95 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC091135.1-201ENST00000585943 307 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC010620.1-201ENST00000601088 1102 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC025811.1-201ENST00000604312 472 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AL670379.2-201ENST00000604983 252 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 AC009509.4-201ENST00000619202 509 ntBASIC1.44□□□□□ -2.18
HLA-DQA1P01909 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
HLA-DQA1P01909 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 RNU6-552P-201ENST00000362869 119 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 SNORD115-3-201ENST00000363100 82 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 RNU6-336P-201ENST00000364891 107 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 RNU6-692P-201ENST00000384496 107 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 RNU6-1222P-201ENST00000384615 107 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 MIR518A2-201ENST00000384966 87 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 DEFB108C-201ENST00000400154 252 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 Y_RNA.597-201ENST00000410463 100 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AL353193.1-201ENST00000421444 268 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 MTCO2P19-201ENST00000427513 598 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AL356320.1-201ENST00000429616 163 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AL360221.1-201ENST00000445989 335 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC098826.2-201ENST00000452011 651 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AL356010.1-201ENST00000456364 102 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 PPP1R2P5-201ENST00000457256 603 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC079382.1-201ENST00000493346 557 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 HMGB3P17-201ENST00000504195 649 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC079140.3-201ENST00000511111 550 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 MRPS17P9-201ENST00000511924 393 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 RNU5F-2P-201ENST00000516066 82 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AP005136.1-201ENST00000579765 429 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC007229.1-201ENST00000590455 412 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 RSL24D1P11-201ENST00000591045 491 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC064859.1-201ENST00000624741 174 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC090582.1-201ENST00000636321 199 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 ZNF702P-202ENST00000434269 1966 ntBASIC1.43□□□□□ -2.18
HLA-DQA1P01909 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DQA1P01909 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 Y_RNA.77-201ENST00000362962 107 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RNU6-1285P-201ENST00000363480 105 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RNU6-743P-201ENST00000364151 106 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 SNORA16.1-201ENST00000364597 132 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RNY3P9-201ENST00000384727 106 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RNU6-1158P-201ENST00000391167 107 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RNA5SP425-201ENST00000410336 112 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RNA5SP450-201ENST00000411206 102 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RPS20P15-201ENST00000412792 311 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 CDK8P2-201ENST00000415020 547 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 EIF1AXP1-201ENST00000419267 435 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 USP9YP18-201ENST00000425912 695 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RPS15AP10-201ENST00000432472 382 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 IFNA20P-201ENST00000436840 528 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 PRELID3BP1-201ENST00000457142 540 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 TPT1P7-201ENST00000458300 517 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 GMFBP1-201ENST00000467831 427 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 SNRPGP7-201ENST00000469016 106 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms