Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL163973.1-201ENST00000484753 577 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC068781.1-201ENST00000488231 618 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC140059.1-201ENST00000489238 361 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.26□□□□□ -2.05
PDGFBP01127 AC074344.1-201ENST00000512823 224 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC105417.1-201ENST00000514691 285 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.26□□□□□ -2.05
PDGFBP01127 AP005435.4-201ENST00000529514 284 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.26□□□□□ -2.05
PDGFBP01127 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.26□□□□□ -2.05
PDGFBP01127 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.26□□□□□ -2.05
PDGFBP01127 AC136619.2-201ENST00000563361 631 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 VN1R80P-201ENST00000597126 338 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.26□□□□□ -2.05
PDGFBP01127 MIR8070-201ENST00000616510 88 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 AC012640.5-201ENST00000623897 319 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 SCARNA4-202ENST00000625402 129 ntBASIC2.26□□□□□ -2.05
PDGFBP01127 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PDGFBP01127 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PDGFBP01127 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 RNU6-1090P-201ENST00000364065 94 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 SNORD14B-201ENST00000364533 90 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 SNORA69-201ENST00000383895 132 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 RNU6-483P-201ENST00000384088 108 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 Y_RNA.516-201ENST00000384541 124 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 Y_RNA.554-201ENST00000384672 102 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 MIR95-201ENST00000385072 81 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 RNU2-29P-201ENST00000410423 189 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 RNU6-321P-201ENST00000410912 106 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 CALM1P1-201ENST00000442082 433 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 PSPHP1-201ENST00000450062 261 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.25□□□□□ -2.05
PDGFBP01127 RPL7P43-201ENST00000478876 753 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 HMGB1P30-201ENST00000492455 606 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 SNORA48.11-201ENST00000517015 89 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 AC109329.1-201ENST00000518744 317 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.25□□□□□ -2.05
PDGFBP01127 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.25□□□□□ -2.05
PDGFBP01127 AP001893.2-201ENST00000526949 202 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 CYCSP26-201ENST00000534107 320 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 AC078814.3-201ENST00000553036 491 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.25□□□□□ -2.05
PDGFBP01127 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.25□□□□□ -2.05
PDGFBP01127 RPS3AP23-202ENST00000574601 686 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 MIR3126-201ENST00000577443 74 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 AC026585.1-201ENST00000619582 524 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 AL031601.2-202ENST00000622650 282 ntBASIC2.25□□□□□ -2.05
PDGFBP01127 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.25□□□□□ -2.05
PDGFBP01127 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDGFBP01127 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-37P-201ENST00000362692 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-1010P-201ENST00000362757 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-11P-201ENST00000364234 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 Y_RNA.255-201ENST00000364581 97 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-25P-201ENST00000383873 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-1-201ENST00000383898 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-48P-201ENST00000384161 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-36P-201ENST00000384172 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-4P-201ENST00000384205 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-5P-201ENST00000384238 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-3P-201ENST00000384314 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-517P-201ENST00000384362 110 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-16P-201ENST00000384385 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-15P-201ENST00000384534 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-2-201ENST00000384627 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-29P-201ENST00000384637 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-9-201ENST00000384776 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-33P-201ENST00000384793 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU2-2P-201ENST00000410396 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-1140P-201ENST00000410517 106 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.24□□□□□ -2.05
PDGFBP01127 AC138623.1-201ENST00000418060 216 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFBP01127 AL669831.1-202ENST00000428504 417 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.24□□□□□ -2.05
PDGFBP01127 AL365400.1-201ENST00000431854 640 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 HMGB1P31-201ENST00000437242 427 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 GTF2IP13-201ENST00000438487 386 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFBP01127 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.24□□□□□ -2.05
PDGFBP01127 AL356010.1-201ENST00000456364 102 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 GMFBP1-201ENST00000467831 427 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PDGFBP01127 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFBP01127 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC104383.1-201ENST00000530297 370 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC121758.2-201ENST00000553271 193 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFBP01127 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.24□□□□□ -2.05
PDGFBP01127 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFBP01127 AC073410.2-201ENST00000603240 332 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 RNU6-6P-201ENST00000606623 107 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 AC093788.1-201ENST00000609356 927 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.15-201ENST00000611544 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.16-201ENST00000613119 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.12-201ENST00000613778 191 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.20-201ENST00000613956 192 ntBASIC2.24□□□□□ -2.05
PDGFBP01127 U2.9-201ENST00000615427 191 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms