Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC007375.1-201ENST00000554513 578 ntBASIC3.18□□□□□ -1.9
ZBED1O96006 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.18□□□□□ -1.9
ZBED1O96006 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
ZBED1O96006 MIR3199-1-201ENST00000582434 88 ntBASIC3.18□□□□□ -1.9
ZBED1O96006 AC078899.3-201ENST00000599065 212 ntBASIC3.18□□□□□ -1.9
ZBED1O96006 AC112487.2-201ENST00000637950 304 ntBASIC3.18□□□□□ -1.9
ZBED1O96006 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZBED1O96006 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ZBED1O96006 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
ZBED1O96006 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZBED1O96006 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.17□□□□□ -1.9
ZBED1O96006 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.17□□□□□ -1.9
ZBED1O96006 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
ZBED1O96006 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 MIR128-1-201ENST00000384921 82 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 MIR887-201ENST00000401258 79 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 BMS1P22-201ENST00000414726 313 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 BX276092.3-201ENST00000424182 230 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.17□□□□□ -1.9
ZBED1O96006 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.17□□□□□ -1.9
ZBED1O96006 AL133396.1-201ENST00000432048 687 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.17□□□□□ -1.9
ZBED1O96006 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.17□□□□□ -1.9
ZBED1O96006 AC096576.1-201ENST00000489014 359 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
ZBED1O96006 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 Y_RNA.675-201ENST00000516389 149 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 Y_RNA.708-201ENST00000516950 96 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 RAB11AP2-201ENST00000545905 639 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.17□□□□□ -1.9
ZBED1O96006 AL355375.2-201ENST00000574825 175 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 MIR4273-201ENST00000582824 84 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 AC078795.3-201ENST00000602913 472 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 AC005000.2-201ENST00000605468 310 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 AC104985.2-201ENST00000620598 500 ntBASIC3.17□□□□□ -1.9
ZBED1O96006 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.17□□□□□ -1.9
ZBED1O96006 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
ZBED1O96006 AC026241.1-201ENST00000517873 2142 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZBED1O96006 Y_RNA.123-201ENST00000363338 102 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 U8.8-201ENST00000365399 135 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 Y_RNA.474-201ENST00000384341 102 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 RNU6-1297P-201ENST00000384415 104 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 MIR218-1-201ENST00000384999 110 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZBED1O96006 RNU6-370P-201ENST00000411008 104 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 USP9YP30-201ENST00000430729 455 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.16□□□□□ -1.9
ZBED1O96006 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.16□□□□□ -1.9
ZBED1O96006 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.16□□□□□ -1.9
ZBED1O96006 AL031659.1-201ENST00000447075 539 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.16□□□□□ -1.9
ZBED1O96006 AC117440.1-201ENST00000474107 571 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 RPS29P2-201ENST00000479278 136 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.16□□□□□ -1.9
ZBED1O96006 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.16□□□□□ -1.9
ZBED1O96006 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.16□□□□□ -1.9
ZBED1O96006 AC018462.2-201ENST00000605375 395 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 AC007318.2-201ENST00000620999 243 ntBASIC3.16□□□□□ -1.9
ZBED1O96006 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZBED1O96006 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZBED1O96006 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZBED1O96006 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.16□□□□□ -1.9
ZBED1O96006 RNU4-73P-201ENST00000363164 141 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 U8.9-201ENST00000365667 134 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 RNU6-142P-201ENST00000384019 107 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 MIR186-201ENST00000384988 86 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 RNU6-1050P-201ENST00000410388 107 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 EIF1AXP1-201ENST00000419267 435 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.15□□□□□ -1.91
ZBED1O96006 AC244670.1-201ENST00000436879 112 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.15□□□□□ -1.91
ZBED1O96006 SNORD5.1-201ENST00000458800 75 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 RPS29P27-201ENST00000463711 170 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 AC016632.1-201ENST00000503994 196 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 RNU6-277P-201ENST00000516272 106 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 SCARNA3-201ENST00000517097 143 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.15□□□□□ -1.91
ZBED1O96006 AC027176.1-201ENST00000560204 514 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 AC109446.1-201ENST00000566172 220 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 AC069234.5-201ENST00000611056 416 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZBED1O96006 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ZBED1O96006 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZBED1O96006 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
ZBED1O96006 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ZBED1O96006 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.91
ZBED1O96006 AC000403.1-201ENST00000613696 3585 ntBASIC3.15□□□□□ -1.91
ZBED1O96006 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ZBED1O96006 RNU6-655P-201ENST00000362858 107 ntBASIC3.14□□□□□ -1.91
ZBED1O96006 SNORD32A-201ENST00000364805 84 ntBASIC3.14□□□□□ -1.91
ZBED1O96006 Y_RNA.504-201ENST00000384481 104 ntBASIC3.14□□□□□ -1.91
ZBED1O96006 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
ZBED1O96006 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.14□□□□□ -1.91
ZBED1O96006 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.14□□□□□ -1.91
ZBED1O96006 AL139281.1-201ENST00000422120 335 ntBASIC3.14□□□□□ -1.91
ZBED1O96006 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms