Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TOP3BO95985 AL359693.1-201ENST00000614959 2407 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.16□□□□□ -1.9
TOP3BO95985 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.16□□□□□ -1.9
TOP3BO95985 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TOP3BO95985 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.16□□□□□ -1.9
TOP3BO95985 OR56A5-201ENST00000340110 738 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 Y_RNA.39-201ENST00000362620 98 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 SNORA46-201ENST00000384762 135 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 MIR325-201ENST00000385260 98 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 RNU6-1109P-201ENST00000391187 107 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 RNU6-607P-201ENST00000411283 108 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.16□□□□□ -1.9
TOP3BO95985 UBE2D3P2-201ENST00000424409 445 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 USP9YP16-201ENST00000430287 407 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AL133396.1-201ENST00000432048 687 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AC009969.1-201ENST00000438726 172 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
TOP3BO95985 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.16□□□□□ -1.9
TOP3BO95985 FABP5P15-201ENST00000453566 214 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AL353752.1-201ENST00000454946 260 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 USP9YP23-201ENST00000455085 407 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 PCMTD1P1-201ENST00000455560 355 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 TRBV12-1-201ENST00000479785 344 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AC018437.1-201ENST00000492214 406 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 RPL30P5-201ENST00000494923 336 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AC091544.4-201ENST00000555268 342 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.16□□□□□ -1.9
TOP3BO95985 SUB1P3-201ENST00000564581 315 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 MIR1273C-201ENST00000578669 77 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 MIR4474-201ENST00000579189 78 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 OR1M4P-201ENST00000589199 287 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.16□□□□□ -1.9
TOP3BO95985 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
TOP3BO95985 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.16□□□□□ -1.9
TOP3BO95985 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
TOP3BO95985 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
TOP3BO95985 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
TOP3BO95985 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TOP3BO95985 RNU2-3P-201ENST00000410144 191 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 RNU6-847P-201ENST00000411115 108 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 AC009310.1-201ENST00000414414 451 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 BX276092.3-201ENST00000424182 230 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.15□□□□□ -1.91
TOP3BO95985 HMGN2P20-201ENST00000437531 273 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 Z82210.1-201ENST00000440037 231 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 RN7SKP132-201ENST00000516001 208 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 Y_RNA.668-201ENST00000516233 93 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 RNU6-1315P-201ENST00000517187 99 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.15□□□□□ -1.91
TOP3BO95985 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TOP3BO95985 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.15□□□□□ -1.91
TOP3BO95985 HIGD1AP1-201ENST00000550979 275 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 UBL5P2-201ENST00000583788 219 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
TOP3BO95985 AL355297.3-201ENST00000604082 446 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 AC107871.2-201ENST00000612894 502 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.15□□□□□ -1.91
TOP3BO95985 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TOP3BO95985 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TOP3BO95985 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TOP3BO95985 CUL1P1-201ENST00000509510 2425 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TOP3BO95985 Y_RNA.106-201ENST00000363189 100 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 Y_RNA.380-201ENST00000365663 111 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 Y_RNA.424-201ENST00000384063 103 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 Y_RNA.512-201ENST00000384518 102 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 CYCSP33-201ENST00000414485 327 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.14□□□□□ -1.91
TOP3BO95985 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP3BO95985 AL353621.1-201ENST00000418219 243 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.14□□□□□ -1.91
TOP3BO95985 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP3BO95985 TMEM167AP1-201ENST00000423409 219 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AL512844.2-201ENST00000433990 593 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP3BO95985 Z98949.2-201ENST00000440996 144 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP3BO95985 AC010095.1-201ENST00000443543 144 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP3BO95985 AC008571.1-201ENST00000467232 300 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 RPL22P13-201ENST00000493291 347 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AC105758.1-201ENST00000506038 399 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP3BO95985 AC022616.4-201ENST00000522985 181 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 CASP1P1-201ENST00000526345 212 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 HSBP1P1-201ENST00000555205 166 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AL157871.3-201ENST00000557231 293 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AL591516.1-201ENST00000611326 274 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AL021879.1-201ENST00000611756 288 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 AC002076.2-201ENST00000617362 122 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 U2.1-201ENST00000618978 145 ntBASIC3.14□□□□□ -1.91
TOP3BO95985 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.14□□□□□ -1.91
TOP3BO95985 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms