Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.89□□□□□ -2.11
MBD3O95983 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.89□□□□□ -2.11
MBD3O95983 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.89□□□□□ -2.11
MBD3O95983 AC244505.5-201ENST00000443639 207 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.89□□□□□ -2.11
MBD3O95983 AC132479.1-201ENST00000449160 144 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AL353705.4-201ENST00000449661 238 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AC013470.1-201ENST00000453438 462 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AL353752.1-201ENST00000454946 260 ntBASIC1.89□□□□□ -2.11
MBD3O95983 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.89□□□□□ -2.11
MBD3O95983 MTCO2P6-201ENST00000463134 685 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.89□□□□□ -2.11
MBD3O95983 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.89□□□□□ -2.11
MBD3O95983 MTND2P33-201ENST00000506452 1031 ntBASIC1.89□□□□□ -2.11
MBD3O95983 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.89□□□□□ -2.11
MBD3O95983 RNU6-1178P-201ENST00000516674 107 ntBASIC1.89□□□□□ -2.11
MBD3O95983 COPS8P3-201ENST00000526024 482 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AC023050.3-201ENST00000541142 333 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.89□□□□□ -2.11
MBD3O95983 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.89□□□□□ -2.11
MBD3O95983 AC243960.4-201ENST00000600532 288 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AL356157.2-201ENST00000605122 111 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AC022418.1-201ENST00000624118 445 ntBASIC1.89□□□□□ -2.11
MBD3O95983 AC091932.3-201ENST00000624223 323 ntBASIC1.89□□□□□ -2.11
MBD3O95983 RNU6-527P-201ENST00000363425 104 ntBASIC1.88□□□□□ -2.11
MBD3O95983 RNU6-282P-201ENST00000365357 103 ntBASIC1.88□□□□□ -2.11
MBD3O95983 RNA5SP465-201ENST00000391195 109 ntBASIC1.88□□□□□ -2.11
MBD3O95983 RNU2-29P-201ENST00000410423 189 ntBASIC1.88□□□□□ -2.11
MBD3O95983 BX295541.1-201ENST00000417774 250 ntBASIC1.88□□□□□ -2.11
MBD3O95983 Z98742.3-201ENST00000418637 326 ntBASIC1.88□□□□□ -2.11
MBD3O95983 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
MBD3O95983 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
MBD3O95983 KATNBL1P3-201ENST00000443475 909 ntBASIC1.88□□□□□ -2.11
MBD3O95983 RPL32P28-201ENST00000443577 397 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.88□□□□□ -2.11
MBD3O95983 AL162395.1-201ENST00000457882 422 ntBASIC1.88□□□□□ -2.11
MBD3O95983 RPL30P12-201ENST00000474666 353 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.88□□□□□ -2.11
MBD3O95983 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.88□□□□□ -2.11
MBD3O95983 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.88□□□□□ -2.11
MBD3O95983 MTCO3P7-201ENST00000510008 774 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
MBD3O95983 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.88□□□□□ -2.11
MBD3O95983 MTCO2P4-201ENST00000517968 247 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.88□□□□□ -2.11
MBD3O95983 AP003392.2-201ENST00000527269 208 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC110588.1-201ENST00000559699 137 ntBASIC1.88□□□□□ -2.11
MBD3O95983 MIR3913-1-201ENST00000577744 102 ntBASIC1.88□□□□□ -2.11
MBD3O95983 BNIP3P16-201ENST00000589779 534 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC018889.1-201ENST00000605372 397 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
MBD3O95983 uc_338.5-201ENST00000611839 155 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC005609.4-201ENST00000625071 447 ntBASIC1.88□□□□□ -2.11
MBD3O95983 AC090517.3-201ENST00000625170 141 ntBASIC1.88□□□□□ -2.11
MBD3O95983 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
MBD3O95983 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MBD3O95983 RNU6-393P-201ENST00000384475 107 ntBASIC1.87□□□□□ -2.11
MBD3O95983 RNU6-456P-201ENST00000384493 107 ntBASIC1.87□□□□□ -2.11
MBD3O95983 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
MBD3O95983 GSTA9P-201ENST00000406231 611 ntBASIC1.87□□□□□ -2.11
MBD3O95983 RPS15AP10-201ENST00000432472 382 ntBASIC1.87□□□□□ -2.11
MBD3O95983 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.87□□□□□ -2.11
MBD3O95983 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3O95983 MTND1P27-201ENST00000451117 902 ntBASIC1.87□□□□□ -2.11
MBD3O95983 AL356010.1-201ENST00000456364 102 ntBASIC1.87□□□□□ -2.11
MBD3O95983 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3O95983 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3O95983 AC079382.1-201ENST00000493346 557 ntBASIC1.87□□□□□ -2.11
MBD3O95983 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3O95983 RNU6-377P-201ENST00000515965 102 ntBASIC1.87□□□□□ -2.11
MBD3O95983 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
MBD3O95983 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3O95983 AP002963.1-201ENST00000530590 184 ntBASIC1.87□□□□□ -2.11
MBD3O95983 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3O95983 MIR4298-201ENST00000584380 73 ntBASIC1.87□□□□□ -2.11
MBD3O95983 Z84480.1-201ENST00000605131 311 ntBASIC1.87□□□□□ -2.11
MBD3O95983 AC087752.4-201ENST00000605911 462 ntBASIC1.87□□□□□ -2.11
MBD3O95983 AP000560.1-201ENST00000624150 1937 ntBASIC1.87□□□□□ -2.11
MBD3O95983 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
MBD3O95983 AL390237.1-201ENST00000404226 1415 ntBASIC1.86□□□□□ -2.11
MBD3O95983 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
MBD3O95983 RNU6-1120P-201ENST00000362988 108 ntBASIC1.86□□□□□ -2.11
MBD3O95983 RNU6-944P-201ENST00000364023 107 ntBASIC1.86□□□□□ -2.11
MBD3O95983 Y_RNA.399-201ENST00000383955 105 ntBASIC1.86□□□□□ -2.11
MBD3O95983 AL033519.2-201ENST00000403958 392 ntBASIC1.86□□□□□ -2.11
MBD3O95983 RNU6-1245P-201ENST00000411130 106 ntBASIC1.86□□□□□ -2.11
MBD3O95983 RN7SKP101-201ENST00000411376 320 ntBASIC1.86□□□□□ -2.11
MBD3O95983 AL139415.2-201ENST00000431968 163 ntBASIC1.86□□□□□ -2.11
MBD3O95983 AL031667.1-201ENST00000440222 725 ntBASIC1.86□□□□□ -2.11
MBD3O95983 MTND2P4-201ENST00000445034 1004 ntBASIC1.86□□□□□ -2.11
MBD3O95983 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
MBD3O95983 PRELID3BP1-201ENST00000457142 540 ntBASIC1.86□□□□□ -2.11
MBD3O95983 ANXA2P1-201ENST00000505539 926 ntBASIC1.86□□□□□ -2.11
MBD3O95983 PTP4A1P4-201ENST00000512479 322 ntBASIC1.86□□□□□ -2.11
MBD3O95983 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
MBD3O95983 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.86□□□□□ -2.11
MBD3O95983 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.86□□□□□ -2.11
MBD3O95983 AC008752.3-201ENST00000588113 712 ntBASIC1.86□□□□□ -2.11
MBD3O95983 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms