Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNU6-39P-201ENST00000384344 107 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 RNU6-296P-201ENST00000384608 107 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 SNORD12-201ENST00000391002 90 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 RNA5SP266-201ENST00000410273 108 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 BRK1P2-201ENST00000442875 223 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 MTND1P33-201ENST00000446251 917 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 RNU6-333P-201ENST00000459117 107 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 SUMO2P16-201ENST00000519475 264 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.1□□□□□ -2.43
POLR1AO95602 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.1□□□□□ -2.43
POLR1AO95602 AC093027.1-201ENST00000546698 429 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 AL136520.1-202ENST00000555494 763 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 AC091057.3-201ENST00000602684 733 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 AC105148.1-201ENST00000604961 409 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 AC004908.3-201ENST00000610248 625 ntBASIC-0.1□□□□□ -2.43
POLR1AO95602 RNA5SP264-201ENST00000363115 107 ntBASIC-0.11□□□□□ -2.43
POLR1AO95602 CALM2P3-201ENST00000400429 449 ntBASIC-0.11□□□□□ -2.43
POLR1AO95602 AL590556.1-201ENST00000423231 483 ntBASIC-0.11□□□□□ -2.43
POLR1AO95602 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.11□□□□□ -2.43
POLR1AO95602 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.11□□□□□ -2.43
POLR1AO95602 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.11□□□□□ -2.43
POLR1AO95602 AC048334.1-201ENST00000477975 159 ntBASIC-0.11□□□□□ -2.43
POLR1AO95602 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.11□□□□□ -2.43
POLR1AO95602 RNA5SP290-201ENST00000517133 127 ntBASIC-0.11□□□□□ -2.43
POLR1AO95602 AC060771.1-201ENST00000582031 164 ntBASIC-0.11□□□□□ -2.43
POLR1AO95602 AC013476.2-201ENST00000614456 459 ntBASIC-0.11□□□□□ -2.43
POLR1AO95602 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.12□□□□□ -2.43
POLR1AO95602 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.12□□□□□ -2.43
POLR1AO95602 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.12□□□□□ -2.43
POLR1AO95602 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.12□□□□□ -2.43
POLR1AO95602 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
POLR1AO95602 MTND1P3-201ENST00000484956 952 ntBASIC-0.12□□□□□ -2.43
POLR1AO95602 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.12□□□□□ -2.43
POLR1AO95602 AC084024.2-201ENST00000503480 791 ntBASIC-0.12□□□□□ -2.43
POLR1AO95602 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.12□□□□□ -2.43
POLR1AO95602 AC016256.1-201ENST00000547971 354 ntBASIC-0.12□□□□□ -2.43
POLR1AO95602 SNORD39.3-201ENST00000584451 71 ntBASIC-0.12□□□□□ -2.43
POLR1AO95602 AC002545.1-201ENST00000592511 181 ntBASIC-0.12□□□□□ -2.43
POLR1AO95602 AC117490.2-201ENST00000610042 594 ntBASIC-0.12□□□□□ -2.43
POLR1AO95602 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
POLR1AO95602 AL133445.2-201ENST00000611191 527 ntBASIC-0.12□□□□□ -2.43
POLR1AO95602 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.13□□□□□ -2.43
POLR1AO95602 MTND4P20-201ENST00000424125 869 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.13□□□□□ -2.43
POLR1AO95602 AL392003.1-201ENST00000434394 243 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AL031313.1-201ENST00000448435 256 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.13□□□□□ -2.43
POLR1AO95602 AC079140.3-201ENST00000511111 550 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 RNU6-165P-201ENST00000517170 99 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 HMGB1P33-201ENST00000563485 527 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AC073349.3-201ENST00000617616 186 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 RNU6-514P-201ENST00000384208 107 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 MIR520A-201ENST00000384862 85 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 TAF13P2-201ENST00000416876 286 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AL353621.1-201ENST00000418219 243 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 FAM204CP-201ENST00000424489 642 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.13□□□□□ -2.43
POLR1AO95602 ELOCP14-201ENST00000428070 331 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AL669831.1-202ENST00000428504 417 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AC093422.3-201ENST00000428506 305 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 ELOCP7-201ENST00000439968 331 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AC104417.1-201ENST00000523974 751 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 MTCO2P15-201ENST00000532655 656 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AP001429.1-201ENST00000602568 530 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AC073410.2-201ENST00000603240 332 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 AC098614.4-201ENST00000607601 462 ntBASIC-0.13□□□□□ -2.43
POLR1AO95602 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
POLR1AO95602 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
POLR1AO95602 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.14□□□□□ -2.43
POLR1AO95602 RNA5SP111-201ENST00000411386 101 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 CCDC58P2-201ENST00000417131 366 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 FABP5P4-201ENST00000437203 171 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.14□□□□□ -2.43
POLR1AO95602 AC002381.1-201ENST00000447049 280 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 AC104982.1-201ENST00000478775 574 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.14□□□□□ -2.43
POLR1AO95602 RNU6-491P-201ENST00000516099 110 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 AC015688.6-201ENST00000577737 104 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.14□□□□□ -2.43
POLR1AO95602 AL671309.1-201ENST00000603750 544 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 AC034229.4-201ENST00000607861 441 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.14□□□□□ -2.43
POLR1AO95602 AC068647.2-201ENST00000637380 353 ntBASIC-0.14□□□□□ -2.43
POLR1AO95602 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
POLR1AO95602 SNORA9.1-201ENST00000362412 131 ntBASIC-0.15□□□□□ -2.43
POLR1AO95602 RNU6-529P-201ENST00000363383 104 ntBASIC-0.15□□□□□ -2.43
POLR1AO95602 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.15□□□□□ -2.43
POLR1AO95602 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.15□□□□□ -2.43
POLR1AO95602 RAD1P2-201ENST00000446414 663 ntBASIC-0.15□□□□□ -2.43
POLR1AO95602 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.15□□□□□ -2.43
POLR1AO95602 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.15□□□□□ -2.43
POLR1AO95602 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.15□□□□□ -2.43
POLR1AO95602 AL353997.4-201ENST00000586196 166 ntBASIC-0.15□□□□□ -2.43
POLR1AO95602 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.15□□□□□ -2.43
POLR1AO95602 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.15□□□□□ -2.43
POLR1AO95602 AL356157.2-201ENST00000605122 111 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms