Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU6-105P-201ENST00000363909 104 ntBASIC2.3□□□□□ -2.04
SIX3O95343 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX3O95343 OR5H15-201ENST00000383696 930 ntBASIC2.3□□□□□ -2.04
SIX3O95343 RNU1-148P-201ENST00000384472 162 ntBASIC2.3□□□□□ -2.04
SIX3O95343 RNU6-1158P-201ENST00000391167 107 ntBASIC2.3□□□□□ -2.04
SIX3O95343 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SIX3O95343 SNORD56-201ENST00000413522 71 ntBASIC2.3□□□□□ -2.04
SIX3O95343 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX3O95343 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
SIX3O95343 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SIX3O95343 USP9YP8-201ENST00000441913 500 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AL122001.1-201ENST00000457027 370 ntBASIC2.3□□□□□ -2.04
SIX3O95343 snoU13.18-201ENST00000459483 104 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AC107401.1-201ENST00000503426 685 ntBASIC2.3□□□□□ -2.04
SIX3O95343 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
SIX3O95343 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.3□□□□□ -2.04
SIX3O95343 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.3□□□□□ -2.04
SIX3O95343 AC022880.1-201ENST00000534017 973 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AP003034.1-201ENST00000534621 422 ntBASIC2.3□□□□□ -2.04
SIX3O95343 MIR4498-201ENST00000577599 66 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AP005136.1-201ENST00000579765 429 ntBASIC2.3□□□□□ -2.04
SIX3O95343 MIR5583-1-201ENST00000580941 59 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AL049779.4-201ENST00000604500 156 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AC123912.5-201ENST00000605470 343 ntBASIC2.3□□□□□ -2.04
SIX3O95343 RNU6-85P-201ENST00000605989 107 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AC245008.1-201ENST00000608123 476 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AC245884.12-201ENST00000615364 59 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AL160394.1-201ENST00000624765 724 ntBASIC2.3□□□□□ -2.04
SIX3O95343 MIR203B-201ENST00000636080 86 ntBASIC2.3□□□□□ -2.04
SIX3O95343 AL354685.2-201ENST00000448218 1447 ntBASIC2.3□□□□□ -2.04
SIX3O95343 MTND5P26-201ENST00000426018 1752 ntBASIC2.3□□□□□ -2.04
SIX3O95343 Z82209.1-201ENST00000422141 2135 ntBASIC2.29□□□□□ -2.04
SIX3O95343 SNORA25B-201ENST00000365507 128 ntBASIC2.29□□□□□ -2.04
SIX3O95343 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIX3O95343 Y_RNA.481-201ENST00000384373 102 ntBASIC2.29□□□□□ -2.04
SIX3O95343 RNU6-1222P-201ENST00000384615 107 ntBASIC2.29□□□□□ -2.04
SIX3O95343 MIR29B2-201ENST00000385055 81 ntBASIC2.29□□□□□ -2.04
SIX3O95343 RNA5SP219-201ENST00000390940 113 ntBASIC2.29□□□□□ -2.04
SIX3O95343 CBX3P9-201ENST00000402326 552 ntBASIC2.29□□□□□ -2.04
SIX3O95343 AL591034.2-201ENST00000402839 359 ntBASIC2.29□□□□□ -2.04
SIX3O95343 AL353193.1-201ENST00000421444 268 ntBASIC2.29□□□□□ -2.04
SIX3O95343 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.29□□□□□ -2.04
SIX3O95343 VN1R108P-201ENST00000431580 830 ntBASIC2.29□□□□□ -2.04
SIX3O95343 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
SIX3O95343 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
SIX3O95343 MTND1P29-201ENST00000448112 647 ntBASIC2.29□□□□□ -2.04
SIX3O95343 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX3O95343 AC091133.4-201ENST00000511142 308 ntBASIC2.29□□□□□ -2.04
SIX3O95343 MTND3P5-201ENST00000512798 333 ntBASIC2.29□□□□□ -2.04
SIX3O95343 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.29□□□□□ -2.04
SIX3O95343 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.29□□□□□ -2.04
SIX3O95343 AC115990.1-201ENST00000526957 301 ntBASIC2.29□□□□□ -2.04
SIX3O95343 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX3O95343 AC024909.2-201ENST00000553035 286 ntBASIC2.29□□□□□ -2.04
SIX3O95343 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX3O95343 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX3O95343 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX3O95343 AC026271.5-201ENST00000577873 130 ntBASIC2.29□□□□□ -2.04
SIX3O95343 AC103810.6-201ENST00000606708 136 ntBASIC2.29□□□□□ -2.04
SIX3O95343 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SIX3O95343 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.28□□□□□ -2.04
SIX3O95343 RNU6-428P-201ENST00000362942 107 ntBASIC2.28□□□□□ -2.04
SIX3O95343 RNU1-23P-201ENST00000363361 144 ntBASIC2.28□□□□□ -2.04
SIX3O95343 RNU6-1085P-201ENST00000363576 107 ntBASIC2.28□□□□□ -2.04
SIX3O95343 RNU6-1322P-201ENST00000364309 107 ntBASIC2.28□□□□□ -2.04
SIX3O95343 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
SIX3O95343 RNU4-66P-201ENST00000365199 138 ntBASIC2.28□□□□□ -2.04
SIX3O95343 Y_RNA.399-201ENST00000383955 105 ntBASIC2.28□□□□□ -2.04
SIX3O95343 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX3O95343 RNU2-66P-201ENST00000410650 161 ntBASIC2.28□□□□□ -2.04
SIX3O95343 RNU2-32P-201ENST00000411193 191 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC009963.1-201ENST00000417265 157 ntBASIC2.28□□□□□ -2.04
SIX3O95343 USP9YP14-201ENST00000430663 563 ntBASIC2.28□□□□□ -2.04
SIX3O95343 RPS15AP28-201ENST00000435088 386 ntBASIC2.28□□□□□ -2.04
SIX3O95343 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.28□□□□□ -2.04
SIX3O95343 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX3O95343 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.28□□□□□ -2.04
SIX3O95343 MTCO2P18-201ENST00000457151 658 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX3O95343 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX3O95343 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC021269.2-201ENST00000532318 330 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.28□□□□□ -2.04
SIX3O95343 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX3O95343 MIR4648-201ENST00000580107 72 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.28□□□□□ -2.04
SIX3O95343 APOOP1-201ENST00000604695 592 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AL360085.1-201ENST00000604713 532 ntBASIC2.28□□□□□ -2.04
SIX3O95343 ELOCP5-201ENST00000604924 333 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC103591.3-201ENST00000608684 209 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC004908.3-201ENST00000610248 625 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC009090.3-201ENST00000616553 565 ntBASIC2.28□□□□□ -2.04
SIX3O95343 AC016717.2-201ENST00000609089 5141 ntBASIC2.28□□□□□ -2.04
SIX3O95343 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SIX3O95343 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIX3O95343 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIX3O95343 MAPK10-266ENST00000641066 6555 ntBASIC2.27□□□□□ -2.05
SIX3O95343 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIX3O95343 Y_RNA.116-201ENST00000363292 103 ntBASIC2.27□□□□□ -2.05
SIX3O95343 RNU6-827P-201ENST00000365553 106 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms