Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.57□□□□□ -2
GPC4O75487 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
GPC4O75487 RNU6-486P-201ENST00000363116 107 ntBASIC2.57□□□□□ -2
GPC4O75487 Y_RNA.100-201ENST00000363141 102 ntBASIC2.57□□□□□ -2
GPC4O75487 RNU6-1283P-201ENST00000365314 105 ntBASIC2.57□□□□□ -2
GPC4O75487 Y_RNA.414-201ENST00000384011 101 ntBASIC2.57□□□□□ -2
GPC4O75487 RNA5SP390-201ENST00000410191 113 ntBASIC2.57□□□□□ -2
GPC4O75487 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.57□□□□□ -2
GPC4O75487 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.57□□□□□ -2
GPC4O75487 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.57□□□□□ -2
GPC4O75487 EIF4EP4-201ENST00000424916 578 ntBASIC2.57□□□□□ -2
GPC4O75487 AC008267.5-201ENST00000424928 265 ntBASIC2.57□□□□□ -2
GPC4O75487 MTCO3P18-201ENST00000440206 761 ntBASIC2.57□□□□□ -2
GPC4O75487 MTCO2P3-201ENST00000442543 421 ntBASIC2.57□□□□□ -2
GPC4O75487 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.57□□□□□ -2
GPC4O75487 AC090515.1-201ENST00000465295 476 ntBASIC2.57□□□□□ -2
GPC4O75487 RPL22P13-201ENST00000493291 347 ntBASIC2.57□□□□□ -2
GPC4O75487 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.57□□□□□ -2
GPC4O75487 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.57□□□□□ -2
GPC4O75487 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.57□□□□□ -2
GPC4O75487 AC107953.1-201ENST00000522216 297 ntBASIC2.57□□□□□ -2
GPC4O75487 CKS1BP7-201ENST00000522230 235 ntBASIC2.57□□□□□ -2
GPC4O75487 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.57□□□□□ -2
GPC4O75487 AC060780.3-201ENST00000589464 80 ntBASIC2.57□□□□□ -2
GPC4O75487 AC096772.1-201ENST00000609146 564 ntBASIC2.57□□□□□ -2
GPC4O75487 MIR7157-201ENST00000635801 60 ntBASIC2.57□□□□□ -2
GPC4O75487 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.57□□□□□ -2
GPC4O75487 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
GPC4O75487 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
GPC4O75487 AC062016.1-201ENST00000355719 319 ntBASIC2.56□□□□□ -2
GPC4O75487 RNU6-1010P-201ENST00000362757 107 ntBASIC2.56□□□□□ -2
GPC4O75487 SNORA5B-201ENST00000363786 132 ntBASIC2.56□□□□□ -2
GPC4O75487 SNORA32.2-201ENST00000384049 122 ntBASIC2.56□□□□□ -2
GPC4O75487 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
GPC4O75487 MTND1P23-201ENST00000416931 372 ntBASIC2.56□□□□□ -2
GPC4O75487 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.56□□□□□ -2
GPC4O75487 AC063976.3-201ENST00000426849 329 ntBASIC2.56□□□□□ -2
GPC4O75487 USP9YP28-201ENST00000435142 589 ntBASIC2.56□□□□□ -2
GPC4O75487 USP9YP8-201ENST00000441913 500 ntBASIC2.56□□□□□ -2
GPC4O75487 AL031659.1-201ENST00000447075 539 ntBASIC2.56□□□□□ -2
GPC4O75487 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.56□□□□□ -2
GPC4O75487 AC108938.1-201ENST00000451204 136 ntBASIC2.56□□□□□ -2
GPC4O75487 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.56□□□□□ -2
GPC4O75487 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.56□□□□□ -2
GPC4O75487 AC018437.1-201ENST00000492214 406 ntBASIC2.56□□□□□ -2
GPC4O75487 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
GPC4O75487 RNU6-256P-201ENST00000516747 97 ntBASIC2.56□□□□□ -2
GPC4O75487 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.56□□□□□ -2
GPC4O75487 AC010186.2-204ENST00000537668 439 ntBASIC2.56□□□□□ -2
GPC4O75487 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.56□□□□□ -2
GPC4O75487 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.56□□□□□ -2
GPC4O75487 AC105245.1-201ENST00000581934 244 ntBASIC2.56□□□□□ -2
GPC4O75487 AC018638.8-201ENST00000588755 281 ntBASIC2.56□□□□□ -2
GPC4O75487 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
GPC4O75487 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.56□□□□□ -2
GPC4O75487 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.56□□□□□ -2
GPC4O75487 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
GPC4O75487 Y_RNA.510-201ENST00000384511 114 ntBASIC2.55□□□□□ -2
GPC4O75487 MIR186-201ENST00000384988 86 ntBASIC2.55□□□□□ -2
GPC4O75487 AL356776.1-201ENST00000406574 447 ntBASIC2.55□□□□□ -2
GPC4O75487 U6atac.2-201ENST00000408644 118 ntBASIC2.55□□□□□ -2
GPC4O75487 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
GPC4O75487 RNU2-23P-201ENST00000410545 195 ntBASIC2.55□□□□□ -2
GPC4O75487 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.55□□□□□ -2
GPC4O75487 RPL7P12-201ENST00000446719 750 ntBASIC2.55□□□□□ -2
GPC4O75487 RPL39P29-201ENST00000447779 157 ntBASIC2.55□□□□□ -2
GPC4O75487 AMD1P1-201ENST00000457220 922 ntBASIC2.55□□□□□ -2
GPC4O75487 AC090096.1-201ENST00000489168 390 ntBASIC2.55□□□□□ -2
GPC4O75487 AC140059.1-201ENST00000489238 361 ntBASIC2.55□□□□□ -2
GPC4O75487 MTCO2P30-201ENST00000503662 364 ntBASIC2.55□□□□□ -2
GPC4O75487 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.55□□□□□ -2
GPC4O75487 AC018710.1-201ENST00000506509 158 ntBASIC2.55□□□□□ -2
GPC4O75487 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.55□□□□□ -2
GPC4O75487 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
GPC4O75487 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
GPC4O75487 SNORA31.18-201ENST00000517043 134 ntBASIC2.55□□□□□ -2
GPC4O75487 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.55□□□□□ -2
GPC4O75487 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.55□□□□□ -2
GPC4O75487 AC243972.3-201ENST00000539655 198 ntBASIC2.55□□□□□ -2
GPC4O75487 TRAV32-201ENST00000553993 340 ntBASIC2.55□□□□□ -2
GPC4O75487 MIR4319-201ENST00000577285 85 ntBASIC2.55□□□□□ -2
GPC4O75487 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
GPC4O75487 BNIP3P16-201ENST00000589779 534 ntBASIC2.55□□□□□ -2
GPC4O75487 AC009314.1-201ENST00000603871 304 ntBASIC2.55□□□□□ -2
GPC4O75487 BNIP3P10-201ENST00000605360 577 ntBASIC2.55□□□□□ -2
GPC4O75487 AL138726.1-201ENST00000614873 333 ntBASIC2.55□□□□□ -2
GPC4O75487 AL159153.1-201ENST00000619688 317 ntBASIC2.55□□□□□ -2
GPC4O75487 CASC19-280ENST00000642102 1351 ntBASIC2.55□□□□□ -2
GPC4O75487 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
GPC4O75487 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GPC4O75487 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
GPC4O75487 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.54□□□□□ -2
GPC4O75487 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GPC4O75487 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GPC4O75487 OR56A5-201ENST00000340110 738 ntBASIC2.54□□□□□ -2
GPC4O75487 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GPC4O75487 Y_RNA.390-201ENST00000383932 102 ntBASIC2.54□□□□□ -2
GPC4O75487 RNU1-57P-201ENST00000384491 166 ntBASIC2.54□□□□□ -2
GPC4O75487 RNA5SP184-201ENST00000411071 108 ntBASIC2.54□□□□□ -2
GPC4O75487 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms