Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNY1P16-201ENST00000363063 111 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS4BO75351 Y_RNA.533-201ENST00000384596 114 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 RNU6-1077P-201ENST00000410506 102 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 AC074117.2-201ENST00000417130 397 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 MRPS18CP6-201ENST00000423587 223 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 MTND3P9-201ENST00000429526 346 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS4BO75351 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS4BO75351 AC243964.1-201ENST00000441814 261 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 AC007969.2-201ENST00000441891 191 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 MRPL42P6-201ENST00000486397 371 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 RNU6-475P-201ENST00000516073 104 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS4BO75351 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS4BO75351 EIF4BP1-201ENST00000554881 351 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 MIR4680-201ENST00000580906 66 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 AC020895.1-201ENST00000595362 272 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 AC136443.5-201ENST00000603741 370 ntBASIC3.22□□□□□ -1.89
VPS4BO75351 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS4BO75351 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
VPS4BO75351 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
VPS4BO75351 HAUS6P2-201ENST00000433254 2404 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS4BO75351 Y_RNA.48-201ENST00000362710 103 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 RNU6-198P-201ENST00000384258 104 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS4BO75351 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS4BO75351 RNU6-985P-201ENST00000410182 104 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS4BO75351 RPL23AP50-201ENST00000434149 455 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS4BO75351 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS4BO75351 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS4BO75351 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS4BO75351 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS4BO75351 AC097462.2-201ENST00000504623 481 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.21□□□□□ -1.9
VPS4BO75351 MTND4LP22-201ENST00000508209 276 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS4BO75351 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS4BO75351 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 SNORA31.23-201ENST00000517219 133 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 GNAI2P1-201ENST00000541815 315 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS4BO75351 AL356157.2-201ENST00000605122 111 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 AC006157.1-201ENST00000611750 366 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS4BO75351 AC241585.2-209ENST00000638217 143 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS4BO75351 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS4BO75351 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS4BO75351 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS4BO75351 MTND4P1-201ENST00000457501 1466 ntBASIC3.21□□□□□ -1.9
VPS4BO75351 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS4BO75351 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
VPS4BO75351 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 MIR148B-201ENST00000362252 99 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 RNU6-1280P-201ENST00000365211 107 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 Y_RNA.364-201ENST00000365532 101 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 RNU6-843P-201ENST00000384454 104 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 SNORD116-20-201ENST00000384529 92 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VPS4BO75351 AL591043.1-201ENST00000432461 424 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS4BO75351 AC124916.1-201ENST00000444020 547 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS4BO75351 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS4BO75351 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS4BO75351 RPL27AP5-201ENST00000469428 449 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS4BO75351 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 RPL30P10-201ENST00000488148 337 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 RPL23AP49-201ENST00000492925 468 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 AC110794.1-201ENST00000505816 425 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS4BO75351 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS4BO75351 Y_RNA.661-201ENST00000516003 99 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 RNU4-77P-201ENST00000516692 156 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS4BO75351 DNAJC8P1-201ENST00000554535 372 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 AC009163.5-201ENST00000575421 637 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
VPS4BO75351 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS4BO75351 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS4BO75351 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS4BO75351 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS4BO75351 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS4BO75351 RNA5SP374-201ENST00000362939 125 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 RNA5SP197-201ENST00000363357 119 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 RNU6-527P-201ENST00000363425 104 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 RNU6-99P-201ENST00000364721 107 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 SNORD32A-201ENST00000364805 84 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 RNU6-487P-201ENST00000365430 104 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 Y_RNA.645-201ENST00000391229 102 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms