Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC104985.3-201ENST00000623479 597 ntBASIC0.46□□□□□ -2.34
PFDN1O60925 AC241585.2-209ENST00000638217 143 ntBASIC0.46□□□□□ -2.34
PFDN1O60925 RPS3AP37-201ENST00000419176 745 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.45□□□□□ -2.34
PFDN1O60925 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.45□□□□□ -2.34
PFDN1O60925 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.45□□□□□ -2.34
PFDN1O60925 AC005741.1-201ENST00000511094 432 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 SNORA26.10-201ENST00000516427 141 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.45□□□□□ -2.34
PFDN1O60925 AC006270.3-201ENST00000605967 1036 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.45□□□□□ -2.34
PFDN1O60925 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 AL133216.2-202ENST00000634512 349 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 AC099654.8-201ENST00000637757 681 ntBASIC0.45□□□□□ -2.34
PFDN1O60925 RNU4-79P-201ENST00000362764 141 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 RNA5SP126-201ENST00000365092 109 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 SMIM11P1-201ENST00000369586 178 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 MIR10B-201ENST00000385011 110 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 MTCO3P41-201ENST00000414801 328 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AL953862.1-201ENST00000423016 168 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 USP9YP14-201ENST00000430663 563 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.44□□□□□ -2.34
PFDN1O60925 AC003071.1-201ENST00000451219 789 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 ATP5J2P3-201ENST00000451550 258 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.44□□□□□ -2.34
PFDN1O60925 MTND2P33-201ENST00000506452 1031 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.44□□□□□ -2.34
PFDN1O60925 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.44□□□□□ -2.34
PFDN1O60925 Y_RNA.687-201ENST00000516558 91 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 DEFB108A-201ENST00000530110 222 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AL590705.4-201ENST00000532209 134 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.44□□□□□ -2.34
PFDN1O60925 AC087897.1-201ENST00000550134 156 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.44□□□□□ -2.34
PFDN1O60925 MIR3912-201ENST00000577566 105 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AC091135.1-201ENST00000585943 307 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.44□□□□□ -2.34
PFDN1O60925 AC124016.2-201ENST00000610058 665 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.44□□□□□ -2.34
PFDN1O60925 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.44□□□□□ -2.34
PFDN1O60925 AL159152.1-201ENST00000635019 2587 ntBASIC0.44□□□□□ -2.34
PFDN1O60925 RNU6-395P-201ENST00000365662 106 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 RNU6-1080P-201ENST00000383982 107 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 MIR10A-201ENST00000385043 110 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 RNA5SP213-201ENST00000391031 106 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 MIR1305-201ENST00000408300 86 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.43□□□□□ -2.34
PFDN1O60925 CYCSP33-201ENST00000414485 327 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.43□□□□□ -2.34
PFDN1O60925 TIMM9P2-201ENST00000419324 266 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 AL355994.1-201ENST00000424379 260 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.43□□□□□ -2.34
PFDN1O60925 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.43□□□□□ -2.34
PFDN1O60925 RNU6-113P-201ENST00000516653 101 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 SNORD60.2-201ENST00000516883 86 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 AP003355.1-201ENST00000518956 587 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 SUMO2P16-201ENST00000519475 264 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 OR8K2P-201ENST00000524645 927 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.43□□□□□ -2.34
PFDN1O60925 AC025423.5-201ENST00000550230 219 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.43□□□□□ -2.34
PFDN1O60925 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.43□□□□□ -2.34
PFDN1O60925 MIR3973-201ENST00000579824 107 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 MIR15A-201ENST00000607334 83 ntBASIC0.43□□□□□ -2.34
PFDN1O60925 MIR378A-201ENST00000362177 66 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 RNU4-15P-201ENST00000362613 141 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 RNU1-96P-201ENST00000364163 162 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 SNORA18.2-201ENST00000383865 132 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 MIR508-201ENST00000384857 115 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 RNA5SP111-201ENST00000411386 101 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.42□□□□□ -2.34
PFDN1O60925 AC011233.1-201ENST00000422812 283 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.42□□□□□ -2.34
PFDN1O60925 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.42□□□□□ -2.34
PFDN1O60925 AC093899.1-201ENST00000457984 376 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 TRBVA-201ENST00000498804 316 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
PFDN1O60925 AC119751.4-201ENST00000507498 357 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 SNORA43.2-201ENST00000516652 128 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.42□□□□□ -2.34
PFDN1O60925 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
PFDN1O60925 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.42□□□□□ -2.34
PFDN1O60925 VN1R82P-201ENST00000601481 356 ntBASIC0.42□□□□□ -2.34
PFDN1O60925 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
PFDN1O60925 Y_RNA.363-201ENST00000365529 113 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 RNU6-468P-201ENST00000384003 109 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 MIR942-201ENST00000401111 86 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 MTCO1P17-201ENST00000411522 491 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 BTF3L4P1-201ENST00000413813 468 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 COX6CP10-201ENST00000416832 224 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 ELOCP9-201ENST00000418624 239 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 RAB28P5-201ENST00000427490 651 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 AC108667.1-201ENST00000428618 249 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 MTCYBP42-201ENST00000444653 1130 ntBASIC0.41□□□□□ -2.34
PFDN1O60925 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms