Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC3O60481 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.63□□□□□ -1.99
ZIC3O60481 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZIC3O60481 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
ZIC3O60481 RNU6-227P-201ENST00000362865 103 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AP000275.1-201ENST00000411943 390 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC3O60481 MTND3P9-201ENST00000429526 346 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC3O60481 AC124916.1-201ENST00000444020 547 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AL031659.1-201ENST00000447075 539 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC3O60481 MTCO3P10-201ENST00000455912 772 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 ELOCP24-201ENST00000456370 334 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.62□□□□□ -1.99
ZIC3O60481 Y_RNA.653-201ENST00000459091 95 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 RN7SL75P-201ENST00000461926 281 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 RPL7P42-201ENST00000481005 679 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 GZMAP1-201ENST00000503054 631 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AC114801.2-201ENST00000503825 781 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
ZIC3O60481 RAC1P5-201ENST00000512182 576 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.62□□□□□ -1.99
ZIC3O60481 CKS1BP7-201ENST00000522230 235 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AL355877.2-201ENST00000603670 358 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AC019159.1-201ENST00000605094 187 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 RNU6-91P-201ENST00000607774 107 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 AC024581.2-201ENST00000619986 252 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.62□□□□□ -1.99
ZIC3O60481 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ZIC3O60481 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.62□□□□□ -1.99
ZIC3O60481 AP003122.5-201ENST00000527668 3766 ntBASIC2.62□□□□□ -1.99
ZIC3O60481 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
ZIC3O60481 SNORA80A-201ENST00000363922 136 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 RNA5SP139-201ENST00000364340 117 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 Y_RNA.315-201ENST00000365117 102 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 Y_RNA.394-201ENST00000383942 103 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 RNU6-1027P-201ENST00000383998 107 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 RNU6-43P-201ENST00000384302 107 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 MIR521-1-201ENST00000384902 87 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 RNA5SP390-201ENST00000410191 113 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 COTL1P1-201ENST00000422309 375 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 MTND1P14-201ENST00000427400 950 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 Z82205.1-201ENST00000428456 297 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 AC107083.1-201ENST00000439643 279 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.61□□□□□ -1.99
ZIC3O60481 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.61□□□□□ -1.99
ZIC3O60481 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 RPS26P21-201ENST00000475397 348 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 AC097473.1-201ENST00000508142 408 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 AC005741.1-201ENST00000511094 432 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 ACA59.1-201ENST00000515966 143 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 SCARNA13-201ENST00000516672 275 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 RN7SKP282-201ENST00000516824 299 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.61□□□□□ -1.99
ZIC3O60481 LARP7P3-201ENST00000579888 337 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 AC090897.2-201ENST00000581715 130 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 PISRT1.1-201ENST00000616930 107 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.61□□□□□ -1.99
ZIC3O60481 UCA1.1-201ENST00000620952 75 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZIC3O60481 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ZIC3O60481 AC093831.2-201ENST00000624393 3427 ntBASIC2.61□□□□□ -1.99
ZIC3O60481 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ZIC3O60481 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ZIC3O60481 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC3O60481 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.6□□□□□ -1.99
ZIC3O60481 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ZIC3O60481 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ZIC3O60481 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZIC3O60481 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.6□□□□□ -1.99
ZIC3O60481 SNORD32A-201ENST00000364805 84 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 SNORA18.3-201ENST00000384122 132 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 MIR147B-201ENST00000390185 80 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 Y_RNA.579-201ENST00000390939 94 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 AL591034.2-201ENST00000402839 359 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 RNU6-1245P-201ENST00000411130 106 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.6□□□□□ -1.99
ZIC3O60481 AC009969.1-201ENST00000438726 172 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 OSTCP8-201ENST00000445117 448 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 RPL30P15-201ENST00000457129 321 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.6□□□□□ -1.99
ZIC3O60481 RNA5SP384-201ENST00000516615 116 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC3O60481 AC109446.1-201ENST00000566172 220 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 MTCO3P13-201ENST00000577757 781 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 MIR4719-201ENST00000585233 84 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 AC044792.1-201ENST00000593294 196 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC3O60481 AC006386.2-201ENST00000624491 75 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 AC012005.1-201ENST00000624575 75 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC3O60481 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.6□□□□□ -1.99
ZIC3O60481 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ZIC3O60481 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ZIC3O60481 AC092435.3-201ENST00000565538 3654 ntBASIC2.6□□□□□ -1.99
ZIC3O60481 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ZIC3O60481 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms