Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.1□□□□□ -1.91
CTIFO43310 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.1□□□□□ -1.91
CTIFO43310 MIR2053-201ENST00000459295 91 ntBASIC3.1□□□□□ -1.91
CTIFO43310 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.1□□□□□ -1.91
CTIFO43310 AC018437.1-201ENST00000492214 406 ntBASIC3.1□□□□□ -1.91
CTIFO43310 RPL23AP94-201ENST00000512518 302 ntBASIC3.1□□□□□ -1.91
CTIFO43310 Y_RNA.670-201ENST00000516255 105 ntBASIC3.1□□□□□ -1.91
CTIFO43310 SNORA9.3-201ENST00000516383 129 ntBASIC3.1□□□□□ -1.91
CTIFO43310 SNORA43.2-201ENST00000516652 128 ntBASIC3.1□□□□□ -1.91
CTIFO43310 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.1□□□□□ -1.91
CTIFO43310 AC022634.1-201ENST00000520765 532 ntBASIC3.1□□□□□ -1.91
CTIFO43310 AC010186.2-204ENST00000537668 439 ntBASIC3.1□□□□□ -1.91
CTIFO43310 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.1□□□□□ -1.91
CTIFO43310 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.1□□□□□ -1.91
CTIFO43310 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTIFO43310 AC019193.3-201ENST00000609144 554 ntBASIC3.1□□□□□ -1.91
CTIFO43310 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.1□□□□□ -1.91
CTIFO43310 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.1□□□□□ -1.91
CTIFO43310 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.1□□□□□ -1.91
CTIFO43310 MTND5P10-201ENST00000603719 1809 ntBASIC3.09□□□□□ -1.91
CTIFO43310 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.09□□□□□ -1.91
CTIFO43310 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.09□□□□□ -1.91
CTIFO43310 MIR6073-201ENST00000352083 89 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RNU6-942P-201ENST00000363002 107 ntBASIC3.09□□□□□ -1.91
CTIFO43310 Y_RNA.404-201ENST00000383978 102 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RNU6-933P-201ENST00000384424 107 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RNU6-1160P-201ENST00000384546 104 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RPL21P75-201ENST00000396599 483 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RPL21P28-201ENST00000401418 483 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AL030996.1-201ENST00000411430 235 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.09□□□□□ -1.91
CTIFO43310 AL137792.2-201ENST00000443484 235 ntBASIC3.09□□□□□ -1.91
CTIFO43310 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.09□□□□□ -1.91
CTIFO43310 PCMTD1P1-201ENST00000455560 355 ntBASIC3.09□□□□□ -1.91
CTIFO43310 BX510359.1-201ENST00000456973 237 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RNU7-187P-201ENST00000458985 68 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RPL21P39-201ENST00000463605 483 ntBASIC3.09□□□□□ -1.91
CTIFO43310 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.09□□□□□ -1.91
CTIFO43310 RN7SL807P-201ENST00000470923 297 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RPL7P42-201ENST00000481005 679 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC093591.1-201ENST00000491435 481 ntBASIC3.09□□□□□ -1.91
CTIFO43310 RPL21P16-201ENST00000495531 483 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.09□□□□□ -1.91
CTIFO43310 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.09□□□□□ -1.91
CTIFO43310 SNRPGP18-201ENST00000553000 214 ntBASIC3.09□□□□□ -1.91
CTIFO43310 TRAV32-201ENST00000553993 340 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC103996.1-201ENST00000555468 102 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.09□□□□□ -1.91
CTIFO43310 AC006504.6-201ENST00000590142 199 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.09□□□□□ -1.91
CTIFO43310 CYP2C61P-201ENST00000604072 290 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AP001836.1-201ENST00000604675 523 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC016925.2-201ENST00000605108 242 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC018462.2-201ENST00000605375 395 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AP000654.2-201ENST00000605633 586 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC009229.3-201ENST00000608056 282 ntBASIC3.09□□□□□ -1.91
CTIFO43310 AC005046.1-201ENST00000608515 625 ntBASIC3.09□□□□□ -1.91
CTIFO43310 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTIFO43310 MIR3651-201ENST00000630427 90 ntBASIC3.09□□□□□ -1.91
CTIFO43310 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CTIFO43310 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CTIFO43310 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTIFO43310 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RNU6-858P-201ENST00000362436 107 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RNU6-527P-201ENST00000363425 104 ntBASIC3.08□□□□□ -1.92
CTIFO43310 DEFA7P-201ENST00000382676 285 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RNU6-890P-201ENST00000384121 107 ntBASIC3.08□□□□□ -1.92
CTIFO43310 MIR512-1-201ENST00000384913 84 ntBASIC3.08□□□□□ -1.92
CTIFO43310 SNORD67-201ENST00000390833 111 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
CTIFO43310 Y_RNA.594-201ENST00000410373 140 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RNU6-1050P-201ENST00000410388 107 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RNA5SP120-201ENST00000410900 112 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RPL19P1-201ENST00000411635 428 ntBASIC3.08□□□□□ -1.92
CTIFO43310 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.08□□□□□ -1.92
CTIFO43310 CR769767.1-201ENST00000436337 346 ntBASIC3.08□□□□□ -1.92
CTIFO43310 AL161651.1-201ENST00000440882 223 ntBASIC3.08□□□□□ -1.92
CTIFO43310 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.08□□□□□ -1.92
CTIFO43310 AC124916.1-201ENST00000444020 547 ntBASIC3.08□□□□□ -1.92
CTIFO43310 AC013470.1-201ENST00000453438 462 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RPL23AP49-201ENST00000492925 468 ntBASIC3.08□□□□□ -1.92
CTIFO43310 AC097473.1-201ENST00000508142 408 ntBASIC3.08□□□□□ -1.92
CTIFO43310 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.08□□□□□ -1.92
CTIFO43310 SMURF2P1-201ENST00000514992 481 ntBASIC3.08□□□□□ -1.92
CTIFO43310 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTIFO43310 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.08□□□□□ -1.92
CTIFO43310 AC009314.1-201ENST00000603871 304 ntBASIC3.08□□□□□ -1.92
CTIFO43310 AL355802.3-201ENST00000607571 545 ntBASIC3.08□□□□□ -1.92
CTIFO43310 AL161423.1-201ENST00000613700 262 ntBASIC3.08□□□□□ -1.92
CTIFO43310 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.08□□□□□ -1.92
CTIFO43310 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTIFO43310 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTIFO43310 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTIFO43310 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CTIFO43310 RNU6-1115P-201ENST00000362490 106 ntBASIC3.07□□□□□ -1.92
CTIFO43310 RNU6-428P-201ENST00000362942 107 ntBASIC3.07□□□□□ -1.92
CTIFO43310 RNU1-105P-201ENST00000363470 161 ntBASIC3.07□□□□□ -1.92
CTIFO43310 Y_RNA.151-201ENST00000363566 112 ntBASIC3.07□□□□□ -1.92
CTIFO43310 RNU6-790P-201ENST00000384479 105 ntBASIC3.07□□□□□ -1.92
CTIFO43310 FTH1P15-201ENST00000406984 280 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms