Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.21□□□□□ -2.06
PHF1O43189 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.21□□□□□ -2.06
PHF1O43189 HMGN2P10-201ENST00000448085 265 ntBASIC2.21□□□□□ -2.06
PHF1O43189 RPL26P9-201ENST00000457466 433 ntBASIC2.21□□□□□ -2.06
PHF1O43189 RPL7P43-201ENST00000478876 753 ntBASIC2.21□□□□□ -2.06
PHF1O43189 RPS29P20-201ENST00000489592 171 ntBASIC2.21□□□□□ -2.06
PHF1O43189 AC113155.1-201ENST00000511141 769 ntBASIC2.21□□□□□ -2.06
PHF1O43189 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.21□□□□□ -2.06
PHF1O43189 RNU4-49P-201ENST00000516080 140 ntBASIC2.21□□□□□ -2.06
PHF1O43189 RN7SKP256-201ENST00000517201 314 ntBASIC2.21□□□□□ -2.06
PHF1O43189 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.21□□□□□ -2.06
PHF1O43189 COPS8P3-201ENST00000526024 482 ntBASIC2.21□□□□□ -2.06
PHF1O43189 AP000889.2-201ENST00000532684 490 ntBASIC2.21□□□□□ -2.06
PHF1O43189 AC027176.1-201ENST00000560204 514 ntBASIC2.21□□□□□ -2.06
PHF1O43189 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.21□□□□□ -2.06
PHF1O43189 MIR4648-201ENST00000580107 72 ntBASIC2.21□□□□□ -2.06
PHF1O43189 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.21□□□□□ -2.06
PHF1O43189 MIR4742-201ENST00000581069 85 ntBASIC2.21□□□□□ -2.06
PHF1O43189 AC023043.2-201ENST00000589678 1026 ntBASIC2.21□□□□□ -2.06
PHF1O43189 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.21□□□□□ -2.06
PHF1O43189 RMST_7.1-201ENST00000621935 268 ntBASIC2.21□□□□□ -2.06
PHF1O43189 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PHF1O43189 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PHF1O43189 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.2□□□□□ -2.06
PHF1O43189 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.2□□□□□ -2.06
PHF1O43189 SNORA25.6-201ENST00000364121 118 ntBASIC2.2□□□□□ -2.06
PHF1O43189 SNORA68.1-201ENST00000364537 132 ntBASIC2.2□□□□□ -2.06
PHF1O43189 RNU5E-4P-201ENST00000364931 120 ntBASIC2.2□□□□□ -2.06
PHF1O43189 SNORD81.2-201ENST00000365153 76 ntBASIC2.2□□□□□ -2.06
PHF1O43189 Y_RNA.373-201ENST00000365600 103 ntBASIC2.2□□□□□ -2.06
PHF1O43189 RNU6-72P-201ENST00000384285 79 ntBASIC2.2□□□□□ -2.06
PHF1O43189 MIR10A-201ENST00000385043 110 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.2□□□□□ -2.06
PHF1O43189 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.2□□□□□ -2.06
PHF1O43189 AC007560.1-201ENST00000426912 237 ntBASIC2.2□□□□□ -2.06
PHF1O43189 RPL7P12-201ENST00000446719 750 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.2□□□□□ -2.06
PHF1O43189 AL353705.4-201ENST00000449661 238 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.2□□□□□ -2.06
PHF1O43189 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.2□□□□□ -2.06
PHF1O43189 AMD1P1-201ENST00000457220 922 ntBASIC2.2□□□□□ -2.06
PHF1O43189 RNU7-138P-201ENST00000459479 64 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.2□□□□□ -2.06
PHF1O43189 RNA5SP458-201ENST00000516188 119 ntBASIC2.2□□□□□ -2.06
PHF1O43189 Y_RNA.691-201ENST00000516611 103 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.2□□□□□ -2.06
PHF1O43189 NACAP3-201ENST00000552100 481 ntBASIC2.2□□□□□ -2.06
PHF1O43189 SCOCP1-201ENST00000554676 349 ntBASIC2.2□□□□□ -2.06
PHF1O43189 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.2□□□□□ -2.06
PHF1O43189 MIR4782-201ENST00000577987 79 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC100830.2-201ENST00000581636 240 ntBASIC2.2□□□□□ -2.06
PHF1O43189 MIR3672-201ENST00000584290 82 ntBASIC2.2□□□□□ -2.06
PHF1O43189 MIR3942-201ENST00000585264 109 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.2□□□□□ -2.06
PHF1O43189 HMGN2P15-201ENST00000585707 270 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC009994.1-201ENST00000606889 253 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AL022345.1-201ENST00000607292 135 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.2□□□□□ -2.06
PHF1O43189 AL121757.2-201ENST00000611223 313 ntBASIC2.2□□□□□ -2.06
PHF1O43189 AC010378.1-201ENST00000619270 362 ntBASIC2.2□□□□□ -2.06
PHF1O43189 MIR7111-201ENST00000619751 72 ntBASIC2.2□□□□□ -2.06
PHF1O43189 CTSLP2-204ENST00000629029 392 ntBASIC2.2□□□□□ -2.06
PHF1O43189 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PHF1O43189 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PHF1O43189 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PHF1O43189 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
PHF1O43189 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PHF1O43189 RNU6-942P-201ENST00000363002 107 ntBASIC2.19□□□□□ -2.06
PHF1O43189 RNU6-658P-201ENST00000384606 106 ntBASIC2.19□□□□□ -2.06
PHF1O43189 RAP1BP3-201ENST00000407180 549 ntBASIC2.19□□□□□ -2.06
PHF1O43189 RNU4-53P-201ENST00000410828 140 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.19□□□□□ -2.06
PHF1O43189 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.19□□□□□ -2.06
PHF1O43189 AL445687.1-201ENST00000439946 251 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.19□□□□□ -2.06
PHF1O43189 AC013470.1-201ENST00000453438 462 ntBASIC2.19□□□□□ -2.06
PHF1O43189 FGF7P4-201ENST00000509595 295 ntBASIC2.19□□□□□ -2.06
PHF1O43189 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.19□□□□□ -2.06
PHF1O43189 RNU6-256P-201ENST00000516747 97 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AC069113.1-201ENST00000517763 267 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.19□□□□□ -2.06
PHF1O43189 AC087854.1-201ENST00000519706 414 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AC022634.1-201ENST00000520765 532 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AP005597.4-201ENST00000526762 229 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.19□□□□□ -2.06
PHF1O43189 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.19□□□□□ -2.06
PHF1O43189 LINC00933-203ENST00000559812 219 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.19□□□□□ -2.06
PHF1O43189 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.19□□□□□ -2.06
PHF1O43189 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.19□□□□□ -2.06
PHF1O43189 MIR5194-201ENST00000582634 120 ntBASIC2.19□□□□□ -2.06
PHF1O43189 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PHF1O43189 AC123912.5-201ENST00000605470 343 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.19□□□□□ -2.06
PHF1O43189 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.19□□□□□ -2.06
PHF1O43189 AL138726.1-201ENST00000614873 333 ntBASIC2.19□□□□□ -2.06
PHF1O43189 AC104260.1-201ENST00000616660 539 ntBASIC2.19□□□□□ -2.06
PHF1O43189 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.19□□□□□ -2.06
PHF1O43189 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.19□□□□□ -2.06
PHF1O43189 U6.99-201ENST00000637524 83 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms