Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MIR208B-201ENST00000401172 77 ntBASIC3.64□□□□□ -1.83
SHOXO15266 MIR548M-201ENST00000408260 86 ntBASIC3.64□□□□□ -1.83
SHOXO15266 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.64□□□□□ -1.83
SHOXO15266 POLR2KP2-201ENST00000438155 177 ntBASIC3.64□□□□□ -1.83
SHOXO15266 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AC010095.1-201ENST00000443543 144 ntBASIC3.64□□□□□ -1.83
SHOXO15266 UQCRBP2-201ENST00000447827 297 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AC009220.1-201ENST00000451614 275 ntBASIC3.64□□□□□ -1.83
SHOXO15266 COX6CP14-201ENST00000469580 174 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AC105129.1-201ENST00000560250 297 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AC233702.2-202ENST00000562547 291 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.64□□□□□ -1.83
SHOXO15266 MIR3923-201ENST00000579521 83 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
SHOXO15266 RPS15AP11-201ENST00000594193 385 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AL078605.1-201ENST00000603529 500 ntBASIC3.64□□□□□ -1.83
SHOXO15266 SNRPGP20-201ENST00000604477 205 ntBASIC3.64□□□□□ -1.83
SHOXO15266 AC068831.7-201ENST00000616954 363 ntBASIC3.64□□□□□ -1.83
SHOXO15266 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHOXO15266 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.64□□□□□ -1.83
SHOXO15266 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHOXO15266 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHOXO15266 MTND5P35-201ENST00000557537 1720 ntBASIC3.64□□□□□ -1.83
SHOXO15266 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHOXO15266 AC125257.1-201ENST00000560400 2930 ntBASIC3.64□□□□□ -1.83
SHOXO15266 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.64□□□□□ -1.83
SHOXO15266 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SHOXO15266 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHOXO15266 AC021146.4-201ENST00000309229 279 ntBASIC3.63□□□□□ -1.83
SHOXO15266 MIR410-201ENST00000362222 80 ntBASIC3.63□□□□□ -1.83
SHOXO15266 MIR411-201ENST00000362239 96 ntBASIC3.63□□□□□ -1.83
SHOXO15266 RNU6-1010P-201ENST00000362757 107 ntBASIC3.63□□□□□ -1.83
SHOXO15266 SNORD114-19-201ENST00000363072 75 ntBASIC3.63□□□□□ -1.83
SHOXO15266 RNU6-961P-201ENST00000363893 105 ntBASIC3.63□□□□□ -1.83
SHOXO15266 RNU6-793P-201ENST00000384233 104 ntBASIC3.63□□□□□ -1.83
SHOXO15266 ABCF2P2-201ENST00000450549 296 ntBASIC3.63□□□□□ -1.83
SHOXO15266 AC010326.1-201ENST00000462726 602 ntBASIC3.63□□□□□ -1.83
SHOXO15266 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.63□□□□□ -1.83
SHOXO15266 Y_RNA.679-201ENST00000516416 91 ntBASIC3.63□□□□□ -1.83
SHOXO15266 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHOXO15266 MIR4480-201ENST00000582492 71 ntBASIC3.63□□□□□ -1.83
SHOXO15266 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.63□□□□□ -1.83
SHOXO15266 AC008749.1-201ENST00000597650 306 ntBASIC3.63□□□□□ -1.83
SHOXO15266 Z83818.1-201ENST00000603584 150 ntBASIC3.63□□□□□ -1.83
SHOXO15266 AL034555.1-201ENST00000604816 211 ntBASIC3.63□□□□□ -1.83
SHOXO15266 AC005520.5-201ENST00000613926 164 ntBASIC3.63□□□□□ -1.83
SHOXO15266 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.63□□□□□ -1.83
SHOXO15266 XIST_intron.1-201ENST00000619444 68 ntBASIC3.63□□□□□ -1.83
SHOXO15266 AC099654.7-201ENST00000635788 2127 ntBASIC3.63□□□□□ -1.83
SHOXO15266 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHOXO15266 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHOXO15266 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
SHOXO15266 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHOXO15266 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHOXO15266 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.62□□□□□ -1.83
SHOXO15266 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SHOXO15266 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHOXO15266 RNU6-378P-201ENST00000384324 107 ntBASIC3.62□□□□□ -1.83
SHOXO15266 U3.26-201ENST00000391236 204 ntBASIC3.62□□□□□ -1.83
SHOXO15266 RNU2-49P-201ENST00000410666 184 ntBASIC3.62□□□□□ -1.83
SHOXO15266 AC023141.4-201ENST00000412031 328 ntBASIC3.62□□□□□ -1.83
SHOXO15266 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.62□□□□□ -1.83
SHOXO15266 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.62□□□□□ -1.83
SHOXO15266 MTND2P29-201ENST00000438595 412 ntBASIC3.62□□□□□ -1.83
SHOXO15266 AC005042.3-201ENST00000453230 174 ntBASIC3.62□□□□□ -1.83
SHOXO15266 RNU6-625P-201ENST00000459412 107 ntBASIC3.62□□□□□ -1.83
SHOXO15266 RN7SL385P-201ENST00000468873 276 ntBASIC3.62□□□□□ -1.83
SHOXO15266 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.62□□□□□ -1.83
SHOXO15266 AC027176.1-201ENST00000560204 514 ntBASIC3.62□□□□□ -1.83
SHOXO15266 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.62□□□□□ -1.83
SHOXO15266 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.62□□□□□ -1.83
SHOXO15266 AC012493.2-201ENST00000595083 291 ntBASIC3.62□□□□□ -1.83
SHOXO15266 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.62□□□□□ -1.83
SHOXO15266 AC091152.2-201ENST00000591628 2569 ntBASIC3.62□□□□□ -1.83
SHOXO15266 CPHL1P-201ENST00000461341 3407 ntBASIC3.62□□□□□ -1.83
SHOXO15266 AL136164.4-201ENST00000625013 2135 ntBASIC3.62□□□□□ -1.83
SHOXO15266 AC010889.1-201ENST00000566193 2666 ntBASIC3.62□□□□□ -1.83
SHOXO15266 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.62□□□□□ -1.83
SHOXO15266 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHOXO15266 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHOXO15266 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHOXO15266 RNA5SP197-201ENST00000363357 119 ntBASIC3.61□□□□□ -1.83
SHOXO15266 Y_RNA.275-201ENST00000364726 110 ntBASIC3.61□□□□□ -1.83
SHOXO15266 SNORA56-201ENST00000383966 129 ntBASIC3.61□□□□□ -1.83
SHOXO15266 RNU6-1310P-201ENST00000384153 107 ntBASIC3.61□□□□□ -1.83
SHOXO15266 Y_RNA.590-201ENST00000410140 107 ntBASIC3.61□□□□□ -1.83
SHOXO15266 RNA5SP38-201ENST00000410750 119 ntBASIC3.61□□□□□ -1.83
SHOXO15266 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.61□□□□□ -1.83
SHOXO15266 SETP5-201ENST00000437270 562 ntBASIC3.61□□□□□ -1.83
SHOXO15266 AL162591.2-201ENST00000449634 317 ntBASIC3.61□□□□□ -1.83
SHOXO15266 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.61□□□□□ -1.83
SHOXO15266 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.61□□□□□ -1.83
SHOXO15266 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.61□□□□□ -1.83
SHOXO15266 AC026470.2-201ENST00000561492 181 ntBASIC3.61□□□□□ -1.83
SHOXO15266 RPL23AP97-201ENST00000568955 471 ntBASIC3.61□□□□□ -1.83
SHOXO15266 MIR4643-201ENST00000577473 78 ntBASIC3.61□□□□□ -1.83
SHOXO15266 MIR4270-201ENST00000581799 70 ntBASIC3.61□□□□□ -1.83
SHOXO15266 AL590240.4-201ENST00000616908 390 ntBASIC3.61□□□□□ -1.83
SHOXO15266 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.61□□□□□ -1.83
SHOXO15266 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms