Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AC068647.1-201ENST00000489539 2265 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CBX4O00257 RNU6-1309P-201ENST00000363305 108 ntBASIC3.54□□□□□ -1.84
CBX4O00257 RNU1-33P-201ENST00000364249 162 ntBASIC3.54□□□□□ -1.84
CBX4O00257 RNU6-1105P-201ENST00000384774 107 ntBASIC3.54□□□□□ -1.84
CBX4O00257 MIR591-201ENST00000385290 95 ntBASIC3.54□□□□□ -1.84
CBX4O00257 SNORD17-201ENST00000390930 237 ntBASIC3.54□□□□□ -1.84
CBX4O00257 Y_RNA.645-201ENST00000391229 102 ntBASIC3.54□□□□□ -1.84
CBX4O00257 MIR190B-201ENST00000401119 79 ntBASIC3.54□□□□□ -1.84
CBX4O00257 RN7SKP61-201ENST00000410642 295 ntBASIC3.54□□□□□ -1.84
CBX4O00257 MTCO3P19-201ENST00000415864 321 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC017079.2-201ENST00000416102 485 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC138623.1-201ENST00000418060 216 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AL358176.2-201ENST00000425769 204 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC005326.1-201ENST00000429197 123 ntBASIC3.54□□□□□ -1.84
CBX4O00257 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.54□□□□□ -1.84
CBX4O00257 OR2AQ1P-201ENST00000451972 200 ntBASIC3.54□□□□□ -1.84
CBX4O00257 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.54□□□□□ -1.84
CBX4O00257 RPL30P12-201ENST00000474666 353 ntBASIC3.54□□□□□ -1.84
CBX4O00257 GZMAP1-201ENST00000503054 631 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.54□□□□□ -1.84
CBX4O00257 AC022616.4-201ENST00000522985 181 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.54□□□□□ -1.84
CBX4O00257 AC113195.1-201ENST00000579952 141 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC124312.5-201ENST00000604451 268 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AP000942.4-201ENST00000604811 241 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC096772.1-201ENST00000609146 564 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC087588.2-201ENST00000617667 426 ntBASIC3.54□□□□□ -1.84
CBX4O00257 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.54□□□□□ -1.84
CBX4O00257 AL353743.1-202ENST00000431724 1695 ntBASIC3.54□□□□□ -1.84
CBX4O00257 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CBX4O00257 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CBX4O00257 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CBX4O00257 AC002543.1-201ENST00000299783 1954 ntBASIC3.53□□□□□ -1.84
CBX4O00257 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.53□□□□□ -1.84
CBX4O00257 ZNF72P-201ENST00000425869 1908 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC092268.1-201ENST00000342691 405 ntBASIC3.53□□□□□ -1.84
CBX4O00257 RNA5SP354-201ENST00000391247 136 ntBASIC3.53□□□□□ -1.84
CBX4O00257 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AL365496.1-201ENST00000426885 215 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC078809.1-201ENST00000427601 140 ntBASIC3.53□□□□□ -1.84
CBX4O00257 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.53□□□□□ -1.84
CBX4O00257 AC009296.1-201ENST00000443146 155 ntBASIC3.53□□□□□ -1.84
CBX4O00257 RNU7-87P-201ENST00000459343 62 ntBASIC3.53□□□□□ -1.84
CBX4O00257 RPL23AP75-201ENST00000491601 451 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC093852.1-201ENST00000503587 266 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC026784.1-201ENST00000507986 352 ntBASIC3.53□□□□□ -1.84
CBX4O00257 RNU6-911P-201ENST00000516523 104 ntBASIC3.53□□□□□ -1.84
CBX4O00257 RNU6-1231P-201ENST00000517185 103 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC026333.2-201ENST00000542164 106 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AL117187.1-201ENST00000555482 181 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.53□□□□□ -1.84
CBX4O00257 MIR5188-201ENST00000583467 113 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AL391813.1-201ENST00000603098 260 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.53□□□□□ -1.84
CBX4O00257 AL355877.2-201ENST00000603670 358 ntBASIC3.53□□□□□ -1.84
CBX4O00257 Z98751.3-201ENST00000604447 521 ntBASIC3.53□□□□□ -1.84
CBX4O00257 RPL23AP88-201ENST00000605759 454 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC138305.3-201ENST00000624988 240 ntBASIC3.53□□□□□ -1.84
CBX4O00257 AC243829.7-201ENST00000633081 225 ntBASIC3.53□□□□□ -1.84
CBX4O00257 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CBX4O00257 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CBX4O00257 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CBX4O00257 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CBX4O00257 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CBX4O00257 Y_RNA.144-201ENST00000363521 113 ntBASIC3.52□□□□□ -1.85
CBX4O00257 RNU6-450P-201ENST00000364654 107 ntBASIC3.52□□□□□ -1.85
CBX4O00257 Y_RNA.380-201ENST00000365663 111 ntBASIC3.52□□□□□ -1.85
CBX4O00257 RNU6-823P-201ENST00000391042 103 ntBASIC3.52□□□□□ -1.85
CBX4O00257 Y_RNA.592-201ENST00000410274 109 ntBASIC3.52□□□□□ -1.85
CBX4O00257 AC244670.1-201ENST00000436879 112 ntBASIC3.52□□□□□ -1.85
CBX4O00257 CHEK2P4-201ENST00000450340 246 ntBASIC3.52□□□□□ -1.85
CBX4O00257 AP001486.1-201ENST00000463339 476 ntBASIC3.52□□□□□ -1.85
CBX4O00257 RPS4XP22-201ENST00000480755 780 ntBASIC3.52□□□□□ -1.85
CBX4O00257 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.52□□□□□ -1.85
CBX4O00257 RN7SKP272-201ENST00000516988 232 ntBASIC3.52□□□□□ -1.85
CBX4O00257 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.52□□□□□ -1.85
CBX4O00257 AP006245.1-201ENST00000522549 120 ntBASIC3.52□□□□□ -1.85
CBX4O00257 AC115990.1-201ENST00000526957 301 ntBASIC3.52□□□□□ -1.85
CBX4O00257 AC021231.3-201ENST00000558497 370 ntBASIC3.52□□□□□ -1.85
CBX4O00257 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.52□□□□□ -1.85
CBX4O00257 AC137590.2-201ENST00000619709 240 ntBASIC3.52□□□□□ -1.85
CBX4O00257 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CBX4O00257 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
CBX4O00257 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CBX4O00257 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CBX4O00257 Y_RNA.133-201ENST00000363428 110 ntBASIC3.51□□□□□ -1.85
CBX4O00257 Y_RNA.152-201ENST00000363578 100 ntBASIC3.51□□□□□ -1.85
CBX4O00257 SNORA29-201ENST00000384183 140 ntBASIC3.51□□□□□ -1.85
CBX4O00257 Y_RNA.557-201ENST00000384680 107 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AC114482.1-201ENST00000418010 247 ntBASIC3.51□□□□□ -1.85
CBX4O00257 DPH3P2-201ENST00000422618 250 ntBASIC3.51□□□□□ -1.85
CBX4O00257 RPL21P40-201ENST00000428586 483 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AL357552.1-201ENST00000445254 415 ntBASIC3.51□□□□□ -1.85
CBX4O00257 MTCO3P8-201ENST00000453691 755 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AC087477.1-201ENST00000465747 340 ntBASIC3.51□□□□□ -1.85
CBX4O00257 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.51□□□□□ -1.85
CBX4O00257 AL049873.1-201ENST00000480540 376 ntBASIC3.51□□□□□ -1.85
CBX4O00257 RPL30P1-201ENST00000488676 339 ntBASIC3.51□□□□□ -1.85
CBX4O00257 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms