Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SUMO2P16-201ENST00000519475 264 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC011979.2-201ENST00000527568 352 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AP003072.2-201ENST00000527756 676 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 EIF1P4-201ENST00000572664 335 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 BPTFP1-201ENST00000579209 492 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC126365.2-201ENST00000580630 379 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AP002906.1-201ENST00000603405 233 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AL139344.1-201ENST00000605228 195 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AL031775.1-201ENST00000607014 887 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AL596245.1-201ENST00000618994 362 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 SNORD3E-202ENST00000627253 216 ntBASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.13□□□□□ -2.43
CPSF4LA6NMK7 RNU6-655P-201ENST00000362858 107 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 RNA5SP219-201ENST00000390940 113 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 CBX3P9-201ENST00000402326 552 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 RAP1BP3-201ENST00000407180 549 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AC138623.1-201ENST00000418060 216 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 TXNL1P1-201ENST00000429528 554 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 RNFT1P2-201ENST00000443064 757 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AL929288.2-201ENST00000446368 407 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 MTND3P4-201ENST00000453537 303 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AL353752.1-201ENST00000454946 260 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AC093534.1-201ENST00000504977 132 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AC079140.3-201ENST00000511111 550 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AC137800.2-201ENST00000574375 120 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AC091805.2-201ENST00000603848 235 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AL031281.1-201ENST00000604049 488 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 MIR3976-201ENST00000606807 139 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 AL163051.2-201ENST00000618976 735 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.14□□□□□ -2.43
CPSF4LA6NMK7 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 RNU6-898P-201ENST00000365627 104 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 MIR29B2-201ENST00000385055 81 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 SNORA16.2-201ENST00000390991 127 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 RPL23AP95-201ENST00000426806 265 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 GPM6BP2-201ENST00000432046 144 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 GPM6BP1-201ENST00000446387 144 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AL162395.1-201ENST00000457882 422 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 MTND1P22-201ENST00000510572 951 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 MTATP6P9-201ENST00000515039 680 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AC022861.1-201ENST00000522981 663 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AC090888.2-201ENST00000559765 1144 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 MIR5695-201ENST00000579717 85 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AC078795.2-201ENST00000602835 1252 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AC022022.2-201ENST00000602989 360 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 RNU6-87P-201ENST00000607561 108 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
CPSF4LA6NMK7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
CPSF4LA6NMK7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 SNORD114-9-201ENST00000364370 72 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 SNORA4.2-201ENST00000365313 147 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 MIR16-1-201ENST00000385271 89 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 MIR140-201ENST00000385282 100 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 RNU6-564P-201ENST00000410983 104 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 USP9YP14-201ENST00000430663 563 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 USP9YP22-201ENST00000438971 294 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 SNRPGP12-201ENST00000449481 213 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 snoU13.14-201ENST00000459372 104 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 MTND1P3-201ENST00000484956 952 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 MTND5P13-201ENST00000513046 1079 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 SUMO2P18-201ENST00000518873 252 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 RN7SL793P-201ENST00000583259 296 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 AL358072.1-201ENST00000604156 575 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 AC011451.2-201ENST00000604303 598 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 MIR371B-201ENST00000638082 66 ntBASIC-0.16□□□□□ -2.44
CPSF4LA6NMK7 RNA5SP62-201ENST00000363457 110 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 SNORA36.2-201ENST00000384004 127 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 RNU6-163P-201ENST00000384396 106 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 RNY1P4-201ENST00000384595 115 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 SNORA75.2-201ENST00000391138 150 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms