Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC097065.2-201ENST00000608159 533 ntBASIC-0.63□□□□□ -2.51
LINC01549A6NIU2 AC138749.5-201ENST00000611461 208 ntBASIC-0.63□□□□□ -2.51
LINC01549A6NIU2 MIR106A-201ENST00000384870 81 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AC010385.1-201ENST00000412374 256 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 MTND1P20-201ENST00000430341 950 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 MTND2P21-201ENST00000436242 1042 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AL160314.1-201ENST00000490836 438 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AC025459.1-201ENST00000504072 156 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 RNU6-581P-201ENST00000516214 105 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 SNORD60.2-201ENST00000516883 86 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AP003049.1-201ENST00000529418 457 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AL356057.1-201ENST00000533798 831 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 RNU6-87P-201ENST00000607561 108 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AL451064.1-201ENST00000607718 471 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 MIR8087-201ENST00000612745 78 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AC009269.6-201ENST00000621778 588 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AL138955.1-201ENST00000622881 1040 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AP003400.6-201ENST00000624698 740 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 U6.107-201ENST00000637108 79 ntBASIC-0.64□□□□□ -2.51
LINC01549A6NIU2 AL133475.1-201ENST00000404414 305 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AC000111.3-201ENST00000433478 193 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AC092991.1-201ENST00000477176 376 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 ACA59.2-201ENST00000517061 156 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 RN7SKP256-201ENST00000517201 314 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AC011979.2-201ENST00000527568 352 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AC016256.1-201ENST00000547971 354 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 MIR4764-201ENST00000580680 88 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AL513534.2-201ENST00000603836 250 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AC112187.2-201ENST00000604345 283 ntBASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.65□□□□□ -2.51
LINC01549A6NIU2 RNU6-944P-201ENST00000364023 107 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 SNORD116-13-201ENST00000384408 92 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 SEPT7P5-201ENST00000434048 306 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 SEPT7P4-201ENST00000437076 306 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 AC016717.1-201ENST00000448918 286 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 RNU2-53P-201ENST00000516257 147 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 BNIP3P6-201ENST00000549284 499 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 HMGB1P51-201ENST00000605166 638 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 AC116165.2-201ENST00000616705 206 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 AC104985.3-201ENST00000623479 597 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 LINC02555-201ENST00000563933 1951 ntBASIC-0.66□□□□□ -2.52
LINC01549A6NIU2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 RNU6-833P-201ENST00000363486 107 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 CCDC58P2-201ENST00000417131 366 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 TXNL1P1-201ENST00000429528 554 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 RPL7P55-201ENST00000450522 746 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 RPL30P6-201ENST00000475925 342 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AC010460.2-201ENST00000509054 677 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AC004853.1-201ENST00000604902 698 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AC006213.5-201ENST00000619673 288 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 AC119674.1-220ENST00000641502 1048 ntBASIC-0.67□□□□□ -2.52
LINC01549A6NIU2 MIR643-201ENST00000385267 97 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 VPS26BP1-201ENST00000417155 755 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 MTATP6P16-201ENST00000434543 526 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 snoU13.30-201ENST00000458951 104 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 RNA5SP290-201ENST00000517133 127 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 AC112693.2-201ENST00000556538 232 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 AC107952.2-201ENST00000606048 486 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 AC011155.2-201ENST00000623202 216 ntBASIC-0.68□□□□□ -2.52
LINC01549A6NIU2 MTND4P5-201ENST00000435821 1374 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 RNA5SP275-201ENST00000363936 118 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 RNU6-898P-201ENST00000365627 104 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 SNORD4A-201ENST00000459174 72 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 AC104692.1-201ENST00000472406 90 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 RPL23AP91-201ENST00000569211 455 ntBASIC-0.69□□□□□ -2.52
LINC01549A6NIU2 MIR1273G-201ENST00000577677 100 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms