Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
CCDC78A2IDD5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC78A2IDD5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC78A2IDD5 RNU6-1109P-201ENST00000391187 107 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC78A2IDD5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC78A2IDD5 RN7SKP210-201ENST00000459176 261 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 U8.20-201ENST00000459445 131 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 AC091179.1-201ENST00000461606 579 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 RPL21P10-201ENST00000463521 490 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC78A2IDD5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC78A2IDD5 AC103996.1-201ENST00000555468 102 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 AC004584.2-201ENST00000570407 410 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 AC009318.2-201ENST00000610917 651 ntBASIC3.34□□□□□ -1.87
CCDC78A2IDD5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC78A2IDD5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC78A2IDD5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC78A2IDD5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
CCDC78A2IDD5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC78A2IDD5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC78A2IDD5 RNU6-78P-201ENST00000362897 107 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 RNU6-778P-201ENST00000363269 103 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 RNA5SP267-201ENST00000364893 126 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 RNU6-805P-201ENST00000365643 106 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCDC78A2IDD5 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 AP000275.1-201ENST00000411943 390 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 HMGN2P30-201ENST00000423237 256 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC78A2IDD5 AL353997.1-201ENST00000432936 108 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 AC008155.2-201ENST00000464337 397 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 MTATP8P1-201ENST00000467115 207 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 AC105758.1-201ENST00000506038 399 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 RNU6-635P-201ENST00000516651 102 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 NACAP3-201ENST00000552100 481 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 CYCSP39-201ENST00000565821 309 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 MIR5195-201ENST00000583555 115 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 MIR4276-201ENST00000584832 70 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 AC124312.5-201ENST00000604451 268 ntBASIC3.33□□□□□ -1.88
CCDC78A2IDD5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC78A2IDD5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC78A2IDD5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC78A2IDD5 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 FAM35CP-201ENST00000554755 2470 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 RNU1-73P-201ENST00000383971 164 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 Y_RNA.533-201ENST00000384596 114 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 Y_RNA.551-201ENST00000384661 102 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AC108059.2-201ENST00000434626 151 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 RPS29P27-201ENST00000463711 170 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 FO393415.2-201ENST00000480085 343 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AC093663.1-201ENST00000497190 394 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 RNU6-1143P-201ENST00000516125 104 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 MIR5188-201ENST00000583467 113 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AL158827.2-201ENST00000602494 330 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AL356157.2-201ENST00000605122 111 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 HMGB1P24-202ENST00000615653 685 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 AL691447.3-201ENST00000635020 330 ntBASIC3.32□□□□□ -1.88
CCDC78A2IDD5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC78A2IDD5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 RNU6-884P-201ENST00000363889 107 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 RNU4-50P-201ENST00000364361 141 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 SET-203ENST00000372688 801 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 RNU6-574P-201ENST00000384265 107 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 MIR518D-201ENST00000385014 87 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC125238.1-201ENST00000448842 249 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC010655.3-201ENST00000478818 450 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms