Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC000403.1-201ENST00000613696 3585 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 SNORD42.2-201ENST00000365570 69 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.473-201ENST00000384333 102 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.579-201ENST00000390939 94 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1245P-201ENST00000411130 106 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1304P-201ENST00000411374 106 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 EIF4EP2-201ENST00000422816 654 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC112220.1-201ENST00000434628 355 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 OSTCP8-201ENST00000445117 448 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC107626.1-201ENST00000471084 183 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 RPL7P42-201ENST00000481005 679 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1170P-201ENST00000515974 106 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 SNORA9.3-201ENST00000516383 129 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AP002404.1-201ENST00000532005 451 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC109446.1-201ENST00000566172 220 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC090897.2-201ENST00000581715 130 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC005899.2-201ENST00000584353 90 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 AC097372.5-201ENST00000623665 376 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 RBBP8P1-201ENST00000449447 1844 ntBASIC2.81□□□□□ -1.96
TCRBV7S3A2A0A539 MAPK10-362ENST00000641864 4484 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 MTND5P10-201ENST00000603719 1809 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.146-201ENST00000363549 102 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 SNORD32A-201ENST00000364805 84 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 CD24P4-201ENST00000382840 243 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-784P-201ENST00000384330 106 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-692P-201ENST00000384496 107 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 SNORA41-201ENST00000384675 132 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 MIR521-1-201ENST00000384902 87 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 SNORA75.6-201ENST00000391318 127 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 RN7SKP27-201ENST00000410684 333 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 AL031659.1-201ENST00000447075 539 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 GSTA11P-201ENST00000452866 669 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 RPL30P15-201ENST00000457129 321 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 AL441985.1-201ENST00000457727 251 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.639-201ENST00000458981 102 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 SMURF2P1-201ENST00000514992 481 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 AC093249.1-201ENST00000567049 203 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 MTCO3P13-201ENST00000577757 781 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 uc_338.14-201ENST00000613162 166 ntBASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TCRBV7S3A2A0A539 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.394-201ENST00000383942 103 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1027P-201ENST00000383998 107 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-851P-201ENST00000384565 107 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AL512633.1-201ENST00000399931 655 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AL138885.1-201ENST00000405921 675 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 EEF1A1P41-201ENST00000414667 207 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AL358075.3-201ENST00000426289 226 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 RPL23AP95-201ENST00000426806 265 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 MTND3P9-201ENST00000429526 346 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC007677.1-201ENST00000445757 515 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC027575.1-201ENST00000481064 460 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 GZMAP1-201ENST00000503054 631 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC083906.5-201ENST00000503722 328 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC093303.1-201ENST00000514549 295 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 RNA5SP384-201ENST00000516615 116 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-307P-201ENST00000516743 106 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 MIR5696-201ENST00000578474 85 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC080078.3-201ENST00000605407 463 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AC099778.2-201ENST00000610904 211 ntBASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 MIR6798-201ENST00000612887 67 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms