Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AP003072.2-201ENST00000527756 676 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC122134.1-202ENST00000569111 1201 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 BNIP3P30-201ENST00000601184 574 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC078795.2-201ENST00000602835 1252 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC022022.2-201ENST00000602989 360 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AL365434.2-201ENST00000607979 234 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 7SK.8-201ENST00000612110 250 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 7SK.11-201ENST00000615477 250 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 7SK.13-201ENST00000622040 250 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC120349.3-201ENST00000624377 529 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 MTND4P16-201ENST00000466108 1367 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 MIR340-201ENST00000362125 95 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 MIR520A-201ENST00000384862 85 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AL117342.1-201ENST00000404861 406 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 SNX2P2-201ENST00000424553 323 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 MTND5P14-201ENST00000441481 1267 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AC132479.1-201ENST00000449160 144 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 HMGB1P28-201ENST00000507778 552 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AC097473.1-201ENST00000508142 408 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AC009646.1-201ENST00000510455 318 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 SLC2A13P1-201ENST00000531560 322 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 MIR924-201ENST00000638017 53 ntBASIC0.43□□□□□ -2.34
TRAV17A0A0B4J275 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 SNORA63D-201ENST00000364359 132 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 U6.112-201ENST00000384129 70 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 MTCO1P56-201ENST00000401674 224 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 DPRXP1-201ENST00000426312 460 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 RPS15AP10-201ENST00000432472 382 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 GTF2IP13-201ENST00000438487 386 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC005094.1-201ENST00000440420 368 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 MTND1P31-201ENST00000449206 961 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 RPL7P55-201ENST00000450522 746 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 RPS27P22-201ENST00000478056 241 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 RPL39P36-201ENST00000490784 156 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AL163195.1-201ENST00000496941 348 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 TRBVA-201ENST00000498804 316 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 RNU6-165P-201ENST00000517170 99 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AP003484.1-201ENST00000530974 250 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC112220.2-201ENST00000605513 533 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 AC092656.1-203ENST00000624134 423 ntBASIC0.42□□□□□ -2.34
TRAV17A0A0B4J275 CDR1-202ENST00000625883 1485 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AL356776.1-201ENST00000406574 447 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 Y_RNA.597-201ENST00000410463 100 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 UBE2V1P10-201ENST00000414685 269 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AC010099.3-201ENST00000423896 409 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AL606517.1-201ENST00000446914 387 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 HSPE1P13-201ENST00000451143 297 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 RPS20P10-201ENST00000451209 253 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 RPL18AP17-201ENST00000455326 198 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 RNA5SP269-201ENST00000459032 137 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 HMGN2P9-201ENST00000476875 229 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 RAP1BP2-201ENST00000478270 544 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 RNA5SP503-201ENST00000517047 117 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 MIR4293-201ENST00000584305 78 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AL358072.1-201ENST00000604156 575 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AC009229.3-201ENST00000608056 282 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AL365204.3-201ENST00000612448 685 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 AL159153.1-201ENST00000619688 317 ntBASIC0.41□□□□□ -2.34
TRAV17A0A0B4J275 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AC016831.2-201ENST00000417179 352 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 RAC1P6-201ENST00000423911 575 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AC099677.2-201ENST00000436385 175 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 MTCO2P25-201ENST00000447065 681 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 ELOCP30-201ENST00000447108 299 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms