Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL365400.1-201ENST00000431854 640 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 FTH1P12-201ENST00000432137 551 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC007969.2-201ENST00000441891 191 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 KATNBL1P3-201ENST00000443475 909 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 RPL9P9-202ENST00000466501 579 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AF131216.2-201ENST00000512316 564 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 Y_RNA.687-201ENST00000516558 91 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC010376.1-201ENST00000522101 334 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC091135.1-201ENST00000585943 307 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC120349.3-201ENST00000624377 529 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 AC095038.3-201ENST00000634439 195 ntBASIC0.72□□□□□ -2.29
TRAV1-1A0A0B4J248 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORA29-201ENST00000384183 140 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR499A-201ENST00000384903 122 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 RN7SKP61-201ENST00000410642 295 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 RNA5SP247-201ENST00000411181 105 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AL031779.1-201ENST00000415663 330 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC123900.1-201ENST00000420390 96 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 HSPE1P9-201ENST00000440046 311 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC006026.2-201ENST00000457376 180 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORD116-28-201ENST00000516123 91 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 RNA5SP404-201ENST00000517118 132 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 MTND4LP25-201ENST00000570218 163 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR5094-201ENST00000578766 85 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC018889.1-201ENST00000605372 397 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC091965.4-201ENST00000607691 587 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR8063-201ENST00000621930 81 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 AC092104.1-201ENST00000497346 1441 ntBASIC0.71□□□□□ -2.3
TRAV1-1A0A0B4J248 Y_RNA.46-201ENST00000362695 102 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RNY4P24-201ENST00000362735 96 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORD56.1-201ENST00000362913 68 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 Y_RNA.238-201ENST00000364441 102 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORD116-12-201ENST00000384468 92 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR194-1-201ENST00000384892 85 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 SNRPEP10-201ENST00000420249 274 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RPL23AP30-201ENST00000432419 501 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 TAF9P1-201ENST00000445421 515 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RPS27AP8-201ENST00000452665 445 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 TAF9P2-201ENST00000454958 515 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC134050.1-201ENST00000495088 933 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 MTND2P33-201ENST00000506452 1031 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 MTCO3P9-201ENST00000506989 781 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC097473.1-201ENST00000508142 408 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU5F-2P-201ENST00000516066 82 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU2-10P-201ENST00000516375 211 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 RNA5SP490-201ENST00000517141 136 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC023050.2-201ENST00000544968 387 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC090115.3-201ENST00000553218 849 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC108747.1-201ENST00000609508 535 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 U6.42-201ENST00000618440 107 ntBASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV1-1A0A0B4J248 MTND5P35-201ENST00000557537 1720 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AC100821.1-201ENST00000523153 2479 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 Y_RNA.191-201ENST00000363972 113 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 SNORD116.1-201ENST00000365628 92 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 MIR520A-201ENST00000384862 85 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 RPS3AP36-201ENST00000398190 775 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 RPL21P111-201ENST00000418453 477 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AC245047.4-201ENST00000433189 144 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 NDUFA5P4-201ENST00000436704 385 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AL122001.1-201ENST00000457027 370 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AC010587.2-201ENST00000511727 448 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 RNA5SP437-201ENST00000517249 129 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 CYP3A52P-201ENST00000563326 91 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 BNIP3P8-201ENST00000597863 560 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AL391001.1-201ENST00000602747 715 ntBASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV1-1A0A0B4J248 AL356596.1-201ENST00000624230 379 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms