Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.28□□□□□ -1.72
GPC6Q9Y625 AL035461.1-201ENST00000421490 332 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 AC006466.1-201ENST00000438721 289 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 S100A11P1-201ENST00000477525 312 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 RPL36AP41-201ENST00000493820 306 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.28□□□□□ -1.72
GPC6Q9Y625 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
GPC6Q9Y625 AC022616.8-201ENST00000533569 253 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 AL110118.1-201ENST00000553543 400 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 MIR4700-201ENST00000578311 74 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 AC020914.4-201ENST00000597690 277 ntBASIC4.28□□□□□ -1.72
GPC6Q9Y625 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GPC6Q9Y625 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
GPC6Q9Y625 AC025031.4-201ENST00000621248 3271 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC022336.2-201ENST00000568966 2538 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GPC6Q9Y625 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GPC6Q9Y625 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GPC6Q9Y625 MAPK10-253ENST00000641010 4072 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 RNU1-62P-201ENST00000362599 164 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 Y_RNA.71-201ENST00000362892 104 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 Y_RNA.218-201ENST00000364218 104 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 Y_RNA.273-201ENST00000364703 102 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 SNORD87-201ENST00000364849 89 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 RNU6-215P-201ENST00000365169 102 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 SNORD37.2-201ENST00000391075 66 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 SNORA26.5-201ENST00000391215 123 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 MIR298-201ENST00000401212 88 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 RPL31P41-201ENST00000477967 372 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 RNU2-12P-201ENST00000517216 168 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 RN7SKP289-201ENST00000517244 295 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC115990.1-201ENST00000526957 301 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC006199.1-201ENST00000548728 219 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC090877.1-201ENST00000561418 344 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 MIR4431-201ENST00000579990 94 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC024940.4-201ENST00000605507 246 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 MIR6853-201ENST00000619642 74 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 MIR3199-2-201ENST00000636243 86 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
GPC6Q9Y625 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
GPC6Q9Y625 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GPC6Q9Y625 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GPC6Q9Y625 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.27□□□□□ -1.73
GPC6Q9Y625 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GPC6Q9Y625 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC110774.1-201ENST00000623567 2018 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 Y_RNA.127-201ENST00000363386 109 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 RN7SKP103-201ENST00000363848 320 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 RNU6-801P-201ENST00000364087 105 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 snoU2_19.4-201ENST00000364329 80 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 RNU6-1264P-201ENST00000383891 107 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 U1.1-201ENST00000384101 164 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 RNU6-622P-201ENST00000384272 103 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 Y_RNA.572-201ENST00000384757 98 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 CBX3P9-201ENST00000402326 552 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC006461.1-201ENST00000412637 326 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 CRYBB2P1-203ENST00000415709 538 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 AIG1P1-201ENST00000503376 148 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 MIR2114-201ENST00000516645 80 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC105137.2-201ENST00000569073 466 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 MIR4480-201ENST00000582492 71 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 DNAJC19P2-201ENST00000593340 302 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC091953.3-201ENST00000623220 236 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GPC6Q9Y625 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GPC6Q9Y625 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GPC6Q9Y625 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 AC010329.5-201ENST00000623497 2174 ntBASIC4.26□□□□□ -1.73
GPC6Q9Y625 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
GPC6Q9Y625 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GPC6Q9Y625 AC006971.1-201ENST00000407916 4486 ntBASIC4.25□□□□□ -1.73
GPC6Q9Y625 Y_RNA.24-201ENST00000362508 103 ntBASIC4.25□□□□□ -1.73
GPC6Q9Y625 RNU6-454P-201ENST00000364292 107 ntBASIC4.25□□□□□ -1.73
GPC6Q9Y625 RNA5SP515-201ENST00000364570 118 ntBASIC4.25□□□□□ -1.73
GPC6Q9Y625 Y_RNA.287-201ENST00000364853 94 ntBASIC4.25□□□□□ -1.73
GPC6Q9Y625 SNORA8.3-201ENST00000384679 139 ntBASIC4.25□□□□□ -1.73
GPC6Q9Y625 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.25□□□□□ -1.73
GPC6Q9Y625 YPEL5P1-201ENST00000419731 367 ntBASIC4.25□□□□□ -1.73
GPC6Q9Y625 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.25□□□□□ -1.73
GPC6Q9Y625 AL135790.2-201ENST00000437701 267 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms