Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 TOMM22P6-201ENST00000465035 409 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AC098869.1-201ENST00000481627 292 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 RN7SKP289-201ENST00000517244 295 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AP002770.2-201ENST00000543613 532 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AC007375.1-201ENST00000554513 578 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 LINC00933-203ENST00000559812 219 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AL109918.3-201ENST00000603072 338 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AC073410.2-201ENST00000603240 332 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AL355877.2-201ENST00000603670 358 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 MIR7851-201ENST00000610611 160 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB4Q9Y5E5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AL161912.2-201ENST00000565707 3007 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 RNU6-50P-201ENST00000362356 103 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 RNU6-212P-201ENST00000362642 104 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 SNORA62.3-201ENST00000365110 153 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 RNU1-73P-201ENST00000383971 164 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 RNY3P4-201ENST00000384428 101 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 RNU2-37P-201ENST00000410695 177 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 RNU2-71P-201ENST00000411395 189 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 RPL26P27-201ENST00000414397 437 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 HMGN2P30-201ENST00000423237 256 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC091286.1-201ENST00000431233 461 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 ANXA2P1-201ENST00000505539 926 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 Y_RNA.673-201ENST00000516306 88 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC026403.1-201ENST00000518938 295 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 MRPS36P4-201ENST00000534436 298 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 SYF2P1-201ENST00000550658 413 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 MIR3690-201ENST00000580266 75 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC012433.1-201ENST00000588916 398 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC020895.1-201ENST00000595362 272 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AC233981.2-201ENST00000611524 1614 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 MFSD8-233ENST00000641482 4860 ntBASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHB4Q9Y5E5 AL133383.2-201ENST00000622958 2336 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.84-201ENST00000363011 104 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 RNU4-9P-201ENST00000364951 139 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 PTMAP2-201ENST00000397627 327 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 RNA5SP129-201ENST00000410276 118 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 RNU2-25P-201ENST00000411041 191 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 RPL21P40-201ENST00000428586 483 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 AC006026.2-201ENST00000457376 180 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 SNORA70.19-201ENST00000516717 90 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 RNA5SP468-201ENST00000516782 93 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 AP004242.1-201ENST00000533701 349 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 AC010928.2-201ENST00000588017 287 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 AC099778.2-201ENST00000610904 211 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 AP001282.2-201ENST00000616149 309 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCDHB4Q9Y5E5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-968P-201ENST00000384076 107 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 MIR215-201ENST00000384858 110 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 MIR218-2-201ENST00000385006 110 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-1203P-201ENST00000410703 110 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 RNU2-64P-201ENST00000411315 191 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 RPS29P4-201ENST00000414733 161 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 BX679664.1-201ENST00000434429 253 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 RPL37P4-201ENST00000448908 268 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 snoU13.30-201ENST00000458951 104 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 HMGB1P35-201ENST00000503360 598 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 MIR3922-201ENST00000585192 84 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 AC034229.5-201ENST00000624258 185 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 SCARNA4-201ENST00000629045 128 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 SRP72P2-201ENST00000344851 1979 ntBASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHB4Q9Y5E5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms