Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC135776.4-201ENST00000624300 1904 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC010889.1-201ENST00000566193 2666 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RNU6-858P-201ENST00000362436 107 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RNY1-201ENST00000364228 113 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.480-201ENST00000384364 102 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.576-201ENST00000384781 102 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL356057.2-201ENST00000403318 432 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RAP1BP3-201ENST00000407180 549 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 C1DP2-201ENST00000418167 426 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC093106.2-201ENST00000428212 385 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL512844.2-201ENST00000433990 593 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 HMGB1P30-201ENST00000492455 606 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC108078.1-201ENST00000508073 725 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RN7SKP298-201ENST00000515950 94 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AP001596.2-201ENST00000608410 312 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 Z99571.1-201ENST00000636677 394 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC093536.2-201ENST00000565257 1406 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC233981.2-201ENST00000611524 1614 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 NACAP2-201ENST00000318548 624 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.33-201ENST00000362591 102 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-1322P-201ENST00000364309 107 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU5E-7P-201ENST00000365290 117 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.402-201ENST00000383972 102 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-19P-201ENST00000384718 107 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC068050.1-201ENST00000394891 380 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU2-9P-201ENST00000410194 145 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU2-25P-201ENST00000411041 191 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC114491.1-201ENST00000416095 246 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 VN1R108P-201ENST00000431580 830 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 PRPS1P1-201ENST00000445305 876 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC074344.1-201ENST00000512823 224 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-567P-201ENST00000516746 107 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 SUB1P1-201ENST00000524415 382 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 OR5AL2P-201ENST00000532185 920 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 GLYCAM1-201ENST00000546596 285 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC087683.1-201ENST00000591187 441 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL162413.1-201ENST00000603198 110 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC064807.4-201ENST00000607201 407 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL512598.1-201ENST00000610158 273 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RMST_6.1-201ENST00000611980 203 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 HULC.1-201ENST00000612720 240 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL158209.2-201ENST00000619266 216 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC007792.1-201ENST00000623023 402 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 MTND5P35-201ENST00000557537 1720 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-778P-201ENST00000363269 103 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-82P-201ENST00000363970 107 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-270P-201ENST00000364131 105 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-1042P-201ENST00000384204 107 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-342P-201ENST00000384521 104 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC138623.1-201ENST00000418060 216 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL022238.1-201ENST00000442557 355 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 BTF3P15-201ENST00000455606 336 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC090096.1-201ENST00000489168 390 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC079140.5-201ENST00000507882 310 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC104136.1-201ENST00000512969 394 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RNU6-314P-201ENST00000516574 104 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 MIR4765-201ENST00000585007 77 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 NDUFA8P1-201ENST00000605525 367 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AL589743.7-201ENST00000612637 233 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC005296.1-201ENST00000616145 209 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 RMST_4.1-201ENST00000616886 107 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 MIR6134-201ENST00000617606 109 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 MIR6734-201ENST00000621166 68 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 uc_338.20-201ENST00000621563 178 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC138627.2-201ENST00000624202 601 ntBASIC1.47□□□□□ -2.17
SHANK1Q9Y566 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SHANK1Q9Y566 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC010329.5-201ENST00000623497 2174 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 RNU6-529P-201ENST00000363383 104 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 RNU6-116P-201ENST00000384042 109 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms