Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AP001486.2-201ENST00000561652 5113 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 LINC02471-203ENST00000641941 4752 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.83-201ENST00000363005 113 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-740P-201ENST00000364734 105 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 SNORA62-201ENST00000365493 153 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.555-201ENST00000384673 110 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.595-201ENST00000410403 105 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RPS29P17-201ENST00000430795 166 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 SNORA71B-202ENST00000439232 272 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RNU7-23P-201ENST00000459465 62 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RN7SL98P-201ENST00000462271 300 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RN7SL303P-201ENST00000469773 251 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 AC115990.1-201ENST00000526957 301 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 MZT1P2-201ENST00000604387 248 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 AC113403.1-201ENST00000604910 193 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 AL137843.1-201ENST00000605078 385 ntBASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.61□□□□□ -1.83
SF3B6Q9Y3B4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 RNU1-14P-201ENST00000362759 152 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-529P-201ENST00000363383 104 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.199-201ENST00000364014 102 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 RNA5SP509-201ENST00000364577 119 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-748P-201ENST00000384648 107 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 RNA5SP252-201ENST00000391131 119 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 MIR208B-201ENST00000401172 77 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AL138878.1-201ENST00000405131 347 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AC245291.1-201ENST00000419501 328 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 SETP5-201ENST00000437270 562 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AL138752.1-201ENST00000452964 351 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 RN7SL271P-201ENST00000487601 295 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 SNORD19.2-201ENST00000516978 73 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AC055872.1-201ENST00000570978 278 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 RPS15AP11-201ENST00000594193 385 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AC005176.2-201ENST00000596933 147 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AC008749.1-201ENST00000597650 306 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AC037487.3-201ENST00000606668 112 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AC140479.6-201ENST00000633535 357 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 MTND5P35-201ENST00000557537 1720 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 AL353746.1-201ENST00000566293 6881 ntBASIC3.6□□□□□ -1.83
SF3B6Q9Y3B4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 AC010889.1-201ENST00000566193 2666 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-799P-201ENST00000363567 107 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-651P-201ENST00000411040 105 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 MRPS10P1-201ENST00000448483 130 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 TPT1P12-201ENST00000448968 492 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 RN7SL691P-201ENST00000494487 301 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.683-201ENST00000516508 93 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 CYP4A27P-201ENST00000567218 190 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 IPO5P1-202ENST00000600039 287 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.59□□□□□ -1.83
SF3B6Q9Y3B4 AC006001.4-201ENST00000622243 395 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms