Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC026371.1-201ENST00000551867 419 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC007151.1-201ENST00000572774 483 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 MIR4790-201ENST00000577799 79 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 MIR4506-201ENST00000584693 77 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC090115.4-201ENST00000609970 188 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 FAM157A-202ENST00000615155 405 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC112487.2-201ENST00000637950 304 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 MIR26A1-201ENST00000362205 77 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 Y_RNA.11-201ENST00000362375 109 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 RNU6-562P-201ENST00000362731 107 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 SET-203ENST00000372688 801 ntTSL 2 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 RNU6-1106P-201ENST00000390845 107 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC074085.1-201ENST00000413598 418 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AL096701.2-201ENST00000416920 238 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 PGBD4P6-201ENST00000421501 610 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 OSTCP8-201ENST00000445117 448 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 TRBV12-1-201ENST00000479785 344 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 RNA5SP385-201ENST00000515947 110 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC073544.1-201ENST00000600110 1595 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC069234.5-201ENST00000611056 416 ntBASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK11AQ9UQ88 AC010889.1-201ENST00000566193 2666 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 RNU4-73P-201ENST00000363164 141 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 MIR1261-201ENST00000408659 82 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 UBE2V1P4-201ENST00000425374 344 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 AL121890.1-201ENST00000435457 205 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 BTF3P15-201ENST00000455606 336 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 AC107626.1-201ENST00000471084 183 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 RNU5F-8P-201ENST00000515941 111 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 Y_RNA.675-201ENST00000516389 149 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 RNA5SP148-201ENST00000516527 94 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 ZNF861P-201ENST00000588126 639 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 MIR1302-1-201ENST00000637932 143 ntBASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK11AQ9UQ88 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 Y_RNA.135-201ENST00000363439 95 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 RNU6-461P-201ENST00000364195 107 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 Y_RNA.384-201ENST00000383909 102 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 AC233279.1-201ENST00000455300 423 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 AC006026.2-201ENST00000457376 180 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 SNORD19.2-201ENST00000516978 73 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 AL359314.1-201ENST00000616913 261 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 Z69720.2-201ENST00000624755 279 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 SCARNA4-202ENST00000625402 129 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 ADAM3A-203ENST00000461344 2157 ntBASIC4.23□□□□□ -1.73
CDK11AQ9UQ88 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 AC138393.1-203ENST00000327086 343 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 RN7SKP123-201ENST00000410732 291 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 RPL19P1-201ENST00000411635 428 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 BMS1P22-201ENST00000414726 313 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 COPS8P3-201ENST00000526024 482 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 MIR3616-201ENST00000584070 92 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 AC113139.1-201ENST00000605049 239 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 MIR7515-201ENST00000637837 67 ntBASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK11AQ9UQ88 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 MIR548K-201ENST00000408406 116 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 Y_RNA.635-201ENST00000459041 101 ntBASIC4.21□□□□□ -1.74
CDK11AQ9UQ88 AC096745.1-201ENST00000509945 370 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms