Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC068700.1-201ENST00000565862 3754 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 AC011266.1-201ENST00000624119 3569 ntBASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PDZRN3Q9UPQ7 MAPK10-253ENST00000641010 4072 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-428P-201ENST00000362942 107 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 MIR488-201ENST00000365739 83 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-281P-201ENST00000384212 103 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 MIR32-201ENST00000384965 70 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 MIR93-201ENST00000385024 80 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 MIR626-201ENST00000385032 94 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 RNU6-763P-201ENST00000390865 106 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 EDDM3CP-201ENST00000415977 425 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 RPL30P3-201ENST00000424262 333 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 AL445687.1-201ENST00000439946 251 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 RNA5SP246-201ENST00000458909 119 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 AC025554.1-201ENST00000505641 188 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 APOOP4-201ENST00000513530 597 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 AC006064.5-201ENST00000541782 248 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 MIR4782-201ENST00000577987 79 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 MIR4458-201ENST00000578872 75 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 DEFB117-201ENST00000602356 141 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 AL161629.2-201ENST00000615347 275 ntBASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.34□□□□□ -1.55
PDZRN3Q9UPQ7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
PDZRN3Q9UPQ7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 SNORA71.3-201ENST00000362582 128 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 SNORD46.1-201ENST00000364139 104 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 MIR548A1-201ENST00000385041 97 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 RPS3AP1-201ENST00000413190 320 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 CRYBB2P1-203ENST00000415709 538 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AC124916.1-201ENST00000444020 547 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 RPL23AP49-201ENST00000492925 468 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 HMGB1P14-201ENST00000557424 591 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AL391813.1-201ENST00000603098 260 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AL442128.1-201ENST00000615151 90 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AC048347.1-201ENST00000624621 427 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 AC068254.2-201ENST00000623938 3577 ntBASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.33□□□□□ -1.56
PDZRN3Q9UPQ7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 AL136964.1-201ENST00000622038 2990 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 MIR208A-201ENST00000362287 71 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 RNU4-10P-201ENST00000364383 140 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 RNU6-1279P-201ENST00000383917 103 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 Y_RNA.393-201ENST00000383936 102 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 Y_RNA.572-201ENST00000384757 98 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 MIR10B-201ENST00000385011 110 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 RPS29P7-201ENST00000439662 171 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 RNA5SP154-201ENST00000516193 111 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 CR383656.7-201ENST00000548164 174 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 HSPE1P5-201ENST00000561489 272 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 AC015720.1-201ENST00000565251 277 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 MIR5685-201ENST00000579080 79 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 AL139395.1-201ENST00000603662 160 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 AC134878.1-201ENST00000619901 243 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 CR392039.5-201ENST00000623201 510 ntBASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN3Q9UPQ7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 RNU6-766P-201ENST00000362478 107 ntBASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 SNORD58C-201ENST00000365223 64 ntBASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 MIR153-2-201ENST00000385225 87 ntBASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 RPL23AP83-201ENST00000434984 473 ntBASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 AL590399.6-201ENST00000446396 307 ntBASIC5.31□□□□□ -1.56
PDZRN3Q9UPQ7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms