Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RNU6-428P-201ENST00000362942 107 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 SNORD46.1-201ENST00000364139 104 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.352-201ENST00000365439 102 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.405-201ENST00000383979 100 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.451-201ENST00000384200 100 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.524-201ENST00000384564 100 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.561-201ENST00000384694 100 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RPL21P75-201ENST00000396599 483 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 MIR190B-201ENST00000401119 79 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RPL21P28-201ENST00000401418 483 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL590556.1-201ENST00000423231 483 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 HMGN2P31-201ENST00000432430 273 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC104332.1-201ENST00000440471 797 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL513124.1-201ENST00000450410 614 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 HMGN2P7-201ENST00000456186 273 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL136097.1-201ENST00000456945 913 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 U8.21-201ENST00000459536 136 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RPL21P39-201ENST00000463605 483 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RPS29P27-201ENST00000463711 170 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC132942.1-201ENST00000486753 483 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RPL30P10-201ENST00000488148 337 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC093591.1-201ENST00000491435 481 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RPL21P16-201ENST00000495531 483 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL359273.1-201ENST00000510918 627 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 RNU6-1338P-201ENST00000516328 91 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 SNORA31.20-201ENST00000517111 133 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL590705.4-201ENST00000532209 134 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 SYF2P1-201ENST00000550658 413 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AL442163.3-201ENST00000554110 156 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 MIR3910-1-201ENST00000580936 111 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC107294.1-201ENST00000609524 467 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC012314.7-201ENST00000619693 93 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC091903.1-201ENST00000624322 454 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 SRP72P2-201ENST00000344851 1979 ntBASIC3.3□□□□□ -1.88
PACSIN3Q9UKS6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC004925.1-201ENST00000624256 2706 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 RNU6-1266P-201ENST00000362794 105 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 SNORA7.2-201ENST00000364446 145 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 SNORD14B-201ENST00000364533 90 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 RNU6-746P-201ENST00000384112 109 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.439-201ENST00000384119 94 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.541-201ENST00000384640 113 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 MIR514A1-201ENST00000385133 98 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 SNORA12.2-201ENST00000391040 156 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 RNU6-493P-201ENST00000391321 108 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC245291.1-201ENST00000419501 328 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 SNORD105B-201ENST00000458770 79 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 snoU13.24-201ENST00000458998 104 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC106707.2-201ENST00000484182 374 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AK3P2-201ENST00000507976 429 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC005921.1-201ENST00000510589 286 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 RNU4-71P-201ENST00000516258 113 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 RNU6-612P-201ENST00000516909 102 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 RNU6-255P-201ENST00000516957 105 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC093023.1-201ENST00000547375 507 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 MIR3133-201ENST00000583157 78 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AC012531.5-201ENST00000611375 151 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 AL161629.2-201ENST00000615347 275 ntBASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PACSIN3Q9UKS6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.200-201ENST00000364018 102 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 SNORD6-201ENST00000365444 73 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 RNA5SP167-201ENST00000365461 116 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 MRPL35P1-201ENST00000404272 572 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 MIR1298-201ENST00000408783 112 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 Y_RNA.602-201ENST00000410535 92 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 snoU13.22-201ENST00000459428 104 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 RPL7P49-201ENST00000471402 708 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms