Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SNORD115-8-201ENST00000363856 82 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RNA5SP72-201ENST00000364442 117 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 SNORD115-38-201ENST00000365037 82 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-487P-201ENST00000365430 104 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-338P-201ENST00000383888 105 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-209P-201ENST00000384118 107 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.541-201ENST00000384640 113 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 SNORA1.3-201ENST00000384676 136 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RPS4XP3-201ENST00000398541 413 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 MIR1179-201ENST00000408703 91 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RNU2-37P-201ENST00000410695 177 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AL159169.1-201ENST00000421119 127 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AC078809.1-201ENST00000427601 140 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RPS15AP7-201ENST00000439294 405 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 CEACAMP4-201ENST00000457676 421 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RNA5SP310-201ENST00000459084 116 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 BTF3L4P4-201ENST00000506381 449 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AC006445.2-201ENST00000510061 472 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-496P-201ENST00000516145 99 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AC026403.1-201ENST00000518938 295 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 CYCSP30-201ENST00000546447 172 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 MIR3609-201ENST00000582661 80 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AL160290.3-201ENST00000604869 165 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AC012603.1-201ENST00000606424 528 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AC098479.1-201ENST00000609225 154 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 MIR3529-201ENST00000637713 78 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 AP001148.1-201ENST00000624124 2359 ntBASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.39□□□□□ -1.87
CDC42EP3Q9UKI2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 RNU1-140P-201ENST00000365040 165 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.462-201ENST00000384268 102 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-937P-201ENST00000384325 106 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 MIR544A-201ENST00000384855 91 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AL603910.2-201ENST00000407268 136 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 Z98941.1-201ENST00000407764 100 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 RNA5SP390-201ENST00000410191 113 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 MIR1911-201ENST00000410783 80 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AC016632.1-201ENST00000503994 196 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-581P-201ENST00000516214 105 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AC006199.1-201ENST00000548728 219 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 MIR4298-201ENST00000584380 73 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 HSPE1P7-201ENST00000604681 321 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AL121772.2-201ENST00000614331 297 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 AC011476.5-201ENST00000615594 130 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDC42EP3Q9UKI2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 Y_RNA.16-201ENST00000362421 102 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 RNA5SP124-201ENST00000362739 110 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 SNORD113-8-201ENST00000363497 74 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 SNORD27-201ENST00000363981 72 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-281P-201ENST00000384212 103 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-622P-201ENST00000384272 103 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 MIR10B-201ENST00000385011 110 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 RNU6-159P-201ENST00000391080 106 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 SNORA26.3-201ENST00000391119 136 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AL591034.1-201ENST00000407447 340 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 RN7SKP156-201ENST00000410308 342 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AC006517.1-201ENST00000480485 328 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 RN7SKP49-201ENST00000516675 260 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AC006064.5-201ENST00000541782 248 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 HSPE1P4-201ENST00000550617 308 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AC022655.2-201ENST00000577280 318 ntBASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDC42EP3Q9UKI2 AC127459.3-201ENST00000624328 466 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms