Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 RNU2-8P-201ENST00000410727 190 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC092809.3-201ENST00000415453 231 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 MTND5P2-201ENST00000442927 1142 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 RPL30P6-201ENST00000475925 342 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC027575.1-201ENST00000481064 460 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 SNORA44.1-201ENST00000517031 108 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AP004607.1-201ENST00000524456 203 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC022880.1-201ENST00000534017 973 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC135279.1-201ENST00000543493 504 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 MTCYBP33-201ENST00000575007 1130 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 CLIC4P2-201ENST00000601934 717 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 Z82243.1-201ENST00000609432 473 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AC024940.5-201ENST00000622889 474 ntBASIC1.84□□□□□ -2.11
CTNNA3Q9UI47 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 RNU6-72P-201ENST00000384285 79 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 MRPL42P2-201ENST00000403169 426 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 RNU2-48P-201ENST00000410694 191 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 RNU6-387P-201ENST00000411331 105 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 MTCYBP5-201ENST00000423752 1135 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AL593851.1-201ENST00000426171 157 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 MTCO3P5-201ENST00000433620 714 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 RPS24P1-201ENST00000438550 371 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AP000797.1-201ENST00000478870 387 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC005178.1-201ENST00000508392 440 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 PTP4A1P4-201ENST00000512479 322 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AP003072.2-201ENST00000527756 676 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AL353778.1-201ENST00000603149 408 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC105129.3-201ENST00000605455 485 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AL022345.1-201ENST00000607292 135 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC012360.2-201ENST00000609349 391 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC012409.4-201ENST00000612923 249 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 SCARNA4-202ENST00000625402 129 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 AC099654.13-201ENST00000639774 207 ntBASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CTNNA3Q9UI47 RNU5E-5P-201ENST00000365379 116 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 BTF3L4P2-201ENST00000392798 346 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 RPL23AP32-201ENST00000395315 459 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 MIR1276-201ENST00000408707 83 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AL031779.1-201ENST00000415663 330 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 HIGD1AP15-201ENST00000416198 280 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC119618.1-201ENST00000434191 222 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC006026.2-201ENST00000457376 180 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 RNU6-970P-201ENST00000516312 107 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC022616.8-201ENST00000533569 253 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 ADI1P3-201ENST00000549509 470 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC009094.1-201ENST00000564443 426 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC112191.3-201ENST00000604371 277 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 U6.42-201ENST00000618440 107 ntBASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CTNNA3Q9UI47 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 RNU6-1210P-201ENST00000363775 107 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 SNORD14B-201ENST00000364533 90 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 RNU6-622P-201ENST00000384272 103 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 SNORA67.6-201ENST00000391093 99 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 RNA5SP390-201ENST00000410191 113 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 RNA5SP501-201ENST00000410990 112 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 SRIP3-201ENST00000413200 219 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AC074117.2-201ENST00000417130 397 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AL589872.1-201ENST00000426602 288 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AL360221.1-201ENST00000445989 335 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 snoU13.14-201ENST00000459372 104 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 TOMM22P6-201ENST00000465035 409 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AL121594.1-201ENST00000475906 575 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AC023790.1-201ENST00000482174 347 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 FAM206BP-201ENST00000510179 541 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AC112206.3-201ENST00000514578 389 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 Y_RNA.672-201ENST00000516289 104 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AP003181.2-201ENST00000528941 181 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms