Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC023141.11-201ENST00000508864 202 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 FGF7P4-201ENST00000509595 295 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RNU6-612P-201ENST00000516909 102 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 AP005639.2-201ENST00000527592 928 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC105245.1-201ENST00000581934 244 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC243960.4-201ENST00000600532 288 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC069294.1-201ENST00000608397 350 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AL133215.3-201ENST00000609801 448 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC022140.2-201ENST00000623500 188 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRFN1Q9P244 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRFN1Q9P244 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LRFN1Q9P244 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
LRFN1Q9P244 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.95□□□□□ -1.94
LRFN1Q9P244 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LRFN1Q9P244 RNU6-529P-201ENST00000363383 104 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 RNU6-1285P-201ENST00000363480 105 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 RNU6-1141P-201ENST00000364520 107 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 RNU6-1317P-201ENST00000364582 104 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 SNORD32A-201ENST00000364805 84 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 RNU6-1180P-201ENST00000364935 107 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 Y_RNA.510-201ENST00000384511 114 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 FO393413.1-201ENST00000402892 195 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.95□□□□□ -1.94
LRFN1Q9P244 CST9LP2-201ENST00000437612 320 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.95□□□□□ -1.94
LRFN1Q9P244 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.95□□□□□ -1.94
LRFN1Q9P244 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.95□□□□□ -1.94
LRFN1Q9P244 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.95□□□□□ -1.94
LRFN1Q9P244 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.95□□□□□ -1.94
LRFN1Q9P244 RPS29P27-201ENST00000463711 170 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 RPL39P5-202ENST00000512505 151 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 AC105029.1-201ENST00000520250 669 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 HPRT1P3-201ENST00000539521 576 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 AC027176.1-201ENST00000560204 514 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 MIR3117-201ENST00000584034 78 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 AL132765.2-201ENST00000610812 351 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 AL591516.1-201ENST00000611326 274 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 AC018692.3-201ENST00000623929 123 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 AL133216.2-202ENST00000634512 349 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 TPTEP1-208ENST00000636884 213 ntBASIC2.95□□□□□ -1.94
LRFN1Q9P244 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LRFN1Q9P244 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LRFN1Q9P244 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
LRFN1Q9P244 MIR422A-201ENST00000362286 90 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 Y_RNA.40-201ENST00000362645 93 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 Y_RNA.184-201ENST00000363884 108 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 RNU6-43P-201ENST00000384302 107 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 RNU6-933P-201ENST00000384424 107 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 Y_RNA.509-201ENST00000384506 99 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.94□□□□□ -1.94
LRFN1Q9P244 AC008267.5-201ENST00000424928 265 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 AC009969.1-201ENST00000438726 172 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 AL445687.1-201ENST00000439946 251 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.94□□□□□ -1.94
LRFN1Q9P244 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.94□□□□□ -1.94
LRFN1Q9P244 UBE2V1P7-201ENST00000446395 340 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 AL031659.1-201ENST00000447075 539 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.94□□□□□ -1.94
LRFN1Q9P244 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.94□□□□□ -1.94
LRFN1Q9P244 AC114801.2-201ENST00000503825 781 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 SNORA25.11-201ENST00000515935 105 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 Y_RNA.682-201ENST00000516457 100 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 AC068657.1-201ENST00000520807 306 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 MIR4790-201ENST00000577799 79 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 MIR2682-201ENST00000580305 110 ntBASIC2.94□□□□□ -1.94
LRFN1Q9P244 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LRFN1Q9P244 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.94□□□□□ -1.94
LRFN1Q9P244 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
LRFN1Q9P244 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LRFN1Q9P244 RNU6-227P-201ENST00000362865 103 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 RNU1-72P-201ENST00000362976 153 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 DYNLT3P1-201ENST00000378574 347 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 AP002088.1-201ENST00000382740 395 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 MIR218-1-201ENST00000384999 110 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 RNU6-220P-201ENST00000390919 107 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 AIMP1P2-201ENST00000425294 312 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 BX679664.1-201ENST00000434429 253 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 HMGB1P18-201ENST00000438801 619 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 EEF1B2P7-201ENST00000451177 676 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 S100A11P2-201ENST00000467589 312 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 AC115990.1-201ENST00000526957 301 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.93□□□□□ -1.94
LRFN1Q9P244 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 MIR3124-201ENST00000582636 67 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms