Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 MIR3922-201ENST00000585192 84 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC006130.2-201ENST00000586202 326 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AL355297.3-201ENST00000604082 446 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 FTX_3.1-201ENST00000610451 147 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 HMGB1P24-202ENST00000615653 685 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC039056.2-201ENST00000622261 511 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 ZNF299P-201ENST00000406845 1804 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RNU1-70P-201ENST00000362618 164 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-78P-201ENST00000362897 107 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-778P-201ENST00000363269 103 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-336P-201ENST00000364891 107 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 MT-TG-201ENST00000387429 68 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-907P-201ENST00000390924 102 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 MIR888-201ENST00000401186 77 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-101P-201ENST00000410323 104 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC099548.1-201ENST00000421443 426 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AL714022.1-201ENST00000439897 151 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RPL21P2-201ENST00000440049 481 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC115115.1-201ENST00000449927 248 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 snoU109.2-201ENST00000459316 135 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RN7SL283P-201ENST00000489055 303 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RPL22P13-201ENST00000493291 347 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 MRPS35P2-201ENST00000508242 191 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-612P-201ENST00000516909 102 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC026403.1-201ENST00000518938 295 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AL161670.1-201ENST00000554348 137 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 H3F3AP1-201ENST00000559984 334 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 Z98751.3-201ENST00000604447 521 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC009318.2-201ENST00000610917 651 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC012442.3-202ENST00000636742 206 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SH3BP4Q9P0V3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-874P-201ENST00000362390 105 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 RNA5SP50-201ENST00000363731 107 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-702P-201ENST00000364982 107 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 MIR521-1-201ENST00000384902 87 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 MIR34A-201ENST00000385130 110 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 RPL21P1-201ENST00000399532 476 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 MIR1252-201ENST00000408861 65 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC108059.2-201ENST00000434626 151 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC098831.1-201ENST00000440661 216 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 U8.21-201ENST00000459536 136 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 HSBP1P1-201ENST00000555205 166 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC110588.1-201ENST00000559699 137 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 MYL12BP1-201ENST00000569826 507 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC004584.2-201ENST00000570407 410 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AL133393.1-201ENST00000603277 287 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC016727.2-201ENST00000603988 621 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 U3.45-201ENST00000607547 219 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 AC091903.1-201ENST00000624322 454 ntBASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SH3BP4Q9P0V3 MTND5P9-201ENST00000503854 1755 ntBASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 MTND3P9-201ENST00000429526 346 ntBASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 AC091286.1-201ENST00000431233 461 ntBASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 HMGN2P31-201ENST00000432430 273 ntBASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 AL353705.1-201ENST00000433468 480 ntBASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3BP4Q9P0V3 AC093852.1-201ENST00000503587 266 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms